Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01674 ATGGATGACGATTACAATAGCGGTGGCCGGAGTGCCGACAAGGCTCCGGCCGCCGAAGATGAAGGAAGCACGGCACCGATTCCCGAAAAGGTAAAAGTAGGTGGTTCTCCATTGTACAGAGTAGATAGAAAGCTTGGAAAAGGAGGGTTTGGACAAGTATACGTTGGTCGGCGAATTGGAGCCGGTGGTGGAGCCGTAGAGGTAGCTTTGAAGTTTGAGCATAAAAGCAGTAAAGGGTGTAATTATGGGCCTCCTTATGAGTGGCAGGTTTATAATACATTAGGTGGTAGTCATGGTATTCCACGAGTTCATTATAAGGGACGGCAAGGTGATTACTATGTTATGGTTATGGATATGCTTGGCCCTAGTCTATGGGATGTTTGGAATAGCAACTCTCACACGATGTCTGCCGAAATGGTGGCATGTATAGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGCTCCCCAGGAACTCATGAGGAGAAAAAGCTTTTTTTGGTTGATCTTGGATTAGCAACCCGCTGGCGTGATAATTCAACTGGCCTTCATGTCGAATATGATCAACGTCCAGATGTATTTAGGGGAACAGTTCGTTATGCAAGTGTACATGCTCATCTTGGTAGAACAGGTAGCAGGAGAGATGATTTGGAATCTCTTGCATACACACTAATCTTCCTTCTTCGTGGTCGGCTTCCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAGAAGATGGCCACCTCCCCAGAAAATTTCTGTAGCTGTTGTCCTCCGCCGTTTCGGCTGTTTGTTGAGTATGTAGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATATATATCACTTTTTGATGGGATCGTTAGTCCAAATCCAGACATCAGACCCATAAATACTGATGGTGCACAGAAGCTTATATATCAGGTTGGACATAAGAGAGTACGATTGACCATGGAAGAAGATGATGATGAACAACCGAAAAAGAAGGTCAGAATGGGAATGCCAGTAACACAATGGATAAGTGTGTACAATGCTCGTCGACCAATGAAGCAAAGATACCATTACAATGTTGCTGATATGAGGCTGCCTCAACACATTGAGAAGGGATATGAGGATGGGTTATTTATCAGCAGTGTAGCTTGTTGTTCTAACCTTTGGGCACTTATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATGAACTTTCATCCTACTTTCTTCACAAGGAATGGATTACAGAACAATGGGAAAATAATTATTACATTAGTGCCATAGCAGGAGCTAAAAATGGTAGCTCATTGGTTGTAATGTCCAAAGGGACCCAATACTTGCAGCAATCCTATAAGGTTAGCGATTCATTTCCATTCAAGTGGATCAATAAAAAATGGAAAGAAGGATTTTACGTCACTGCTATGGCCACTGCTGGAAGCAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAACTTGATTTCCTGTATCCGAGTGAAGGTATTCATCGAAGATGGGACAATGGTTACCGCATCACTTCAACTGCTGCTACATGGGACCAAGCTGCTTTTGTTCTTAGTGTTCCAAGAAGGAAACCGGTTGAGGAAACTCAAGAGACACTCCGCACAACCGCCTTTCCTAGTACTCATGTCAAGGAAAAATGGTCAAAGAACCTCTATATTTCATCTATTTGCTATGGGAGAACAATTCTCTCTGACAAATTCTCTGAAAAAAGCCGTTCAGCATTGATGAACTAA 1842 0.4273 MDDDYNSGGRSADKAPAAEDEGSTAPIPEKVKVGGSPLYRVDRKLGKGGFGQVYVGRRIGAGGGAVEVALKFEHKSSKGCNYGPPYEWQVYNTLGGSHGIPRVHYKGRQGDYYVMVMDMLGPSLWDVWNSNSHTMSAEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGSPGTHEEKKLFLVDLGLATRWRDNSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENFCSCCPPPFRLFVEYVVNLKFDEEPNYAKYISLFDGIVSPNPDIRPINTDGAQKLIYQVGHKRVRLTMEEDDDEQPKKKVRMGMPVTQWISVYNARRPMKQRYHYNVADMRLPQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTAQVYELSSYFLHKEWITEQWENNYYISAIAGAKNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWKEGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAAFVLSVPRRKPVEETQETLRTTAFPSTHVKEKWSKNLYISSICYGRTILSDKFSEKSRSALMN* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01674 613 PANTHER CASEIN KINASE-RELATED 39 567 - -
Rops9g01674 613 FunFam casein kinase 1-like protein HD16 12 355 - -
Rops9g01674 613 MobiDBLite consensus disorder prediction 1 17 - -
Rops9g01674 613 CDD STKc_CK1 39 308 - -
Rops9g01674 613 ProSiteProfiles Protein kinase domain profile. 39 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01674 613 MobiDBLite consensus disorder prediction 1 31 - -
Rops9g01674 613 Pfam Protein kinase domain 39 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01674 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Rops9g01674 613 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
Rops9g01674 613 Gene3D Transferase(Phosphotransferase) domain 1 8 356 - -
Rops9g01674 613 SMART serkin_6 39 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01674 613 SUPERFAMILY Protein kinase-like (PK-like) 39 316 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01674 Rops-Chr9 29305045 29312469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01674 38 251 EF-hand Containing Proteins AT4G04720 27.523 1.21e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Rops9g01674 Pkinase 5.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01674 - - vvi:100254265 1129.78