Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01668 ATGGACCCTTGCGATCTTGGTACACCGAAGCTCCAAGCAGGAGGTGAAGGGTCCTCTGCGGGTGAGAACAGTAAGAAGAAGAGAAAATCCCCCATAAAAGTCACTCCACGAAAAAGAAGTTCAAAGAATAGCACACCAACAAAAAATGCAACAATTAATGGAATTAAGGGAACAACATCACCTGATTCAGCTAGGAAGATTGATTTGCGGTTGGAGGCGAAATTGTCAGCTGAGGAAAATTCAAGGATGTTTGCAGGACGGCAAATACATCCATTTTTTTCGTTGTGGAAGGAGGGGAAGAAATTTCGGGAGCCTGCTGATTCAGAAGGTAGTTCACTCACTGCTGAGAGGGAAGGTGAAAGGATTGCCTATGGTCCTATCCATGTATTTGAAGATATTTGGGATGATACTTCATCTCTTGACTGGAGTGACTGGACATTTTTAGGAAATACCACCATTGTGGATTATGGTCCGGAAAGTTCAAATTTACCAGTCATGGAGGCTTCTGTTGAATCGTTAACTTTTCATACTTCCCGTGCTTCAATTTCTCAGAATACCTTGTCTTGTTCCGATCAACTTTCTATGCAGCCAGATAATAGGCTGGAAACATCACCAGCAAACTCAGCTGTGCTAGCTAATGTGCAAACAATATGCCCTTTGAAGCCAGAAGATGCCAAAGTGGACATGGAGATGGATGAAGTCAGCACTGTATTAGGGCAAGTGGGCATTTGCAGAAAGTCAGATACTGAGCCACTGAGTAGATCTCTTCAAGAAAGTATGAGGTCTTACTACCATAGTTGTAAAGATAAGGATCAGAGCAGCTTGTGGATACACAAGTACCAGCCAACAAAGGCCTCTGAGGTGTGCGGTAATGATGAATCTCTGAATTTCTTGCATAACTGGTTACATCTTTGGCATGAAAGACGTTATCAAAGCAGAAAGGATTCCTCTAACAGGGATCAGAGTGACATGCAAGTTGATGATGATGATTATAACTGTTCTGATAGTGACAATGGTTCAAAAGATATCAACAAGGAGGATTCCCTGCAGAATGTTCTTTTGATTACAGGACCAATTGCGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCGGGAGCAAGGTTTTAAGGTTTTAGAGCTCAATGCATCAGACTGTCGCAATGGTGCTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGTCTCACATGGTTTCAAAAGGTTACTGGAACACACTGTGAAATCACCGAAGAAAACTGTGAAATTGCCCCCAGCTCCAGCTTTGCCTAATGGTAAAGCAGCTGAGGAAACAGATGATGAGGTGATTGAACCGATAACCATATCCAATGATGAAGCCCATAGTCCTGGTGGAACATCTCGGAGGTTACATGACAAAAATAATGTATTTACTTGTGATAGTGTGCAAACTTTAATTCTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACACATTGCTGAGACAGCAAAAGGGCCAATTATATTGACCAGCAACAGTAATACTGCTGGCCTGCCGGATAATTTTGCTAGACTACATGTTTCTTTCTCATTACCATTGCCAGATGAGTTGCTTTGCCATTTGTACATGATTTGTGTCACAGAAGAAGTCAACATCAATCCTCTTTTACTGGAGAAGTTTATCCAGTCTTGCGATGGAGATATTCGGAAAACCATTATGCATCTTCAGTTCTGGCTCCAGAATAAAAAATACAGGAAAGACAGGAAAGTGCAGACAGTATATGGATCACTTCCGTTTGATCTTGAAGCTGGTCATCAGATACTACCAAAGATAATACCCTGGAATTTTCCCTCAGAGTTATCCAAACTAATTGAGAAGGAAGTTTCCAAGTCAGTAACCATAATGGAAGAAAACTCATGCTTGCAGGGGTTAGTTGAGGAAGAGCTTCACGTAAATGAAAAGCAAAACGATTTAGATGTGCAGTGTATGGGGACTGATTATTTAGAAGCCAAGGTAGAAATGATGAAAAGGAAGAGATCTATTACAGACTGCAGTAAGTTTGAAAGTCAATATTGTTCTATTTCTGAGCTTTCTAATTGTTCTGGATGCCCGGTAACATCCTCTTGGGAAAAGGGCCAAAGGAAACTTGTGATGTCCTCTGAGTCTGAGGATAAGGATCCAAATAATGGACATTCTCTAGACGTTTATGATGAAGCTTACAAGAGACAATCCCTTGAAGGATACAGTGAATCTTCTCATCAGTTTCAATTGAATCAAAGCAACACCAGTAGGTCATTTTGTAAGCTGGTTTTTTCTGGTTTGGAGGATTCGGAGGAACAGTGTAACTATTTAGAAACAGCTTATGATGCATGCTTAAACGAAACACGTAAATCATTTGATATATCCAGTTTTCCAGAATCAATAATTGTTCCTGAGGCTGCAATTCAGAATAGAATAGAGACAATGTCTGGAGCAGTGTCTTCTGGACATCTTGCTGGTCCGCTAGAAGTTTCTCTGGATAATCAGGTGACACCATTCACTTTCAGTGTTTGTGAGCACTTAGCCAAATTGCCACAAAATTTGGATTTATTGGCGAATACTGACATTCCAGAATCTTCTCCAAAAGCAGTTGTGCAAGATTTTAGAGATGAGAACATGGAAACCACAACTGTGTGTAACGTGATGAATGAGTGCAGTCATGCTGATTTTAAGTTGAAGTCAGAATTTGAGAAGCCGAGTCCATCTATGGAGATGGATACGGTACAAAATTTGTGGAGGGAACTTCGTCATTGTCGAACAGATTTAAGACAGCATGCCTCCTCCGAACACCTAGCTTCTGTTCAAGTTGTTAAACTTACTAGTGGGATGAGCAATCTAATTTCAGAAGCTGACTTGATGTTTCGTAATCACCAACAAAACCAATGTGGTATTATGGAACCTCCAATGTTCCTTTCTGATGAAGCCACATTTAGTTGGTATGATGAGCAAATGATGATGTCCACTGTTGCTGAACATGGTTTTTGTTTTTATGCCAAACGTATATCAGATTTGGGATCAAAGTTGGGTTGTGAGCACAGGGTAGATTTAACTTCAGAGATGTTGGCTTCCACTACTAATATTATGGCACTGGGGAAGTTATCTAGACAGGATCCCTCAAAAAGCATAAGTAACCATACGGAAAAGCAATTAGAGGTGAACATAAGAAATGATACAAAGAGCAAACAATACAATAAAAAAAGAACATCTTTGTTCAACGTGATCCAGTCCATTGTTCCTGCAAGATTATCATTGGCAATGAAAGGTATTGTATTCAATGAATATCTATCTTCACTGCGCCAAATTTCAATTTCAGAAGGTTTCCGCATTTCACAAGGTGTTAAAAAGATGAGAAAAGGAAGGATGAGGGGTCCTCAACATTATTTAAGCAGAGAGCCTGAGCATGTTGACTTGGAATCTGGATTAAGAACTATAAATGGAGATAGTGACATCAATGCCATGTGTGATGCATTTTTAAGTTATCCGCATAAGAATGACATGCATATTTACTTTGAGCACCCTATAGTAGAACCTGAAGTCATAGAGTTAGATGGAGACAATGATGGGCTATGTTTTGAGGGTGATGAGTTGGTAGATGATCCAAATGTGAAAGTTAATACTGAAAATGATGCAAGTGAGACTGATGCTGAGAAAAAAGATACAGCAAAGCAGAAAAAGAGTGATCTATTGCCTACCCTGCAAGAGGTGATGCCTGGTGCACATCATAGGAACTATGTGTTGCATATATGGAAAAATTTCATCAAACAATGGAAGGATAAGGAGTTGAGGCACATTGTGTGGGAGTGTACTAGGTGCATGACTATCACTGAGTTTAGGGTGAGTATGGAGAAGTTGAAAAGAATCAATGAGAGAGCTTTGGATTATTTGAACAAGATAAACCCTGCAACTTGGGTCAAGGCTTACTATAGCCATTGGCCAAAGTGTGACAATATCACCAATAATAATTGTGAAGTGTAG 4017 0.403 MDPCDLGTPKLQAGGEGSSAGENSKKKRKSPIKVTPRKRSSKNSTPTKNATINGIKGTTSPDSARKIDLRLEAKLSAEENSRMFAGRQIHPFFSLWKEGKKFREPADSEGSSLTAEREGERIAYGPIHVFEDIWDDTSSLDWSDWTFLGNTTIVDYGPESSNLPVMEASVESLTFHTSRASISQNTLSCSDQLSMQPDNRLETSPANSAVLANVQTICPLKPEDAKVDMEMDEVSTVLGQVGICRKSDTEPLSRSLQESMRSYYHSCKDKDQSSLWIHKYQPTKASEVCGNDESLNFLHNWLHLWHERRYQSRKDSSNRDQSDMQVDDDDYNCSDSDNGSKDINKEDSLQNVLLITGPIASGKSAAVYACAREQGFKVLELNASDCRNGAAVKQYFGDALVSHGFKRLLEHTVKSPKKTVKLPPAPALPNGKAAEETDDEVIEPITISNDEAHSPGGTSRRLHDKNNVFTCDSVQTLILVEDVDILFPEDRGCIAAIQHIAETAKGPIILTSNSNTAGLPDNFARLHVSFSLPLPDELLCHLYMICVTEEVNINPLLLEKFIQSCDGDIRKTIMHLQFWLQNKKYRKDRKVQTVYGSLPFDLEAGHQILPKIIPWNFPSELSKLIEKEVSKSVTIMEENSCLQGLVEEELHVNEKQNDLDVQCMGTDYLEAKVEMMKRKRSITDCSKFESQYCSISELSNCSGCPVTSSWEKGQRKLVMSSESEDKDPNNGHSLDVYDEAYKRQSLEGYSESSHQFQLNQSNTSRSFCKLVFSGLEDSEEQCNYLETAYDACLNETRKSFDISSFPESIIVPEAAIQNRIETMSGAVSSGHLAGPLEVSLDNQVTPFTFSVCEHLAKLPQNLDLLANTDIPESSPKAVVQDFRDENMETTTVCNVMNECSHADFKLKSEFEKPSPSMEMDTVQNLWRELRHCRTDLRQHASSEHLASVQVVKLTSGMSNLISEADLMFRNHQQNQCGIMEPPMFLSDEATFSWYDEQMMMSTVAEHGFCFYAKRISDLGSKLGCEHRVDLTSEMLASTTNIMALGKLSRQDPSKSISNHTEKQLEVNIRNDTKSKQYNKKRTSLFNVIQSIVPARLSLAMKGIVFNEYLSSLRQISISEGFRISQGVKKMRKGRMRGPQHYLSREPEHVDLESGLRTINGDSDINAMCDAFLSYPHKNDMHIYFEHPIVEPEVIELDGDNDGLCFEGDELVDDPNVKVNTENDASETDAEKKDTAKQKKSDLLPTLQEVMPGAHHRNYVLHIWKNFIKQWKDKELRHIVWECTRCMTITEFRVSMEKLKRINERALDYLNKINPATWVKAYYSHWPKCDNITNNNCEV* 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01668 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 274 593 IPR027417 -
Rops9g01668 1338 MobiDBLite consensus disorder prediction 37 60 - -
Rops9g01668 1338 MobiDBLite consensus disorder prediction 312 326 - -
Rops9g01668 1338 MobiDBLite consensus disorder prediction 1223 1239 - -
Rops9g01668 1338 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 535 596 - -
Rops9g01668 1338 MobiDBLite consensus disorder prediction 1 63 - -
Rops9g01668 1338 MobiDBLite consensus disorder prediction 715 734 - -
Rops9g01668 1338 MobiDBLite consensus disorder prediction 1215 1239 - -
Rops9g01668 1338 MobiDBLite consensus disorder prediction 717 734 - -
Rops9g01668 1338 Gene3D - 273 530 IPR027417 -
Rops9g01668 1338 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 20 1144 IPR004582 GO:0006281
Rops9g01668 1338 Gene3D - 533 595 - -
Rops9g01668 1338 MobiDBLite consensus disorder prediction 312 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01668 Rops-Chr9 29217748 29236016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01668 250 578 Core DNA Replication Machinery Family AT5G22010 22.189 8.08e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01668 K26118 - gmx:100815984 1441.4