Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01633 ATGGCAGATTCAAGGGTGGAAACGATCGCCCGATTAGCCCAATGGAAAATCGAGAACTTTGGTCCCTGTTCTTACAAGAAATCAGACCCTTTCAAGCTTGGAATTTGGAACTGGTACTTGTCTATAGAGAGAAATAGATACCTCTATATACATCTTTTTCCTGAGCCCTCACGGCTTTCTAAGGAACAGCCACCTGTTGCTCGTTTCATTCTACGAGTCTCCAGTACTGGTTCCTCCCGCAAATTTTATATTTCCCCTGTTCATGAACGAGTGCTTAGGACATGTGATGACTTTGTCTGGCCTGTGGATACTACATTCCTTGGTCGCTTCGTTATTGATGTTGAATTTCTCGACCTGAAGATCTGCCCTCTGAATGGTGGAGAAGCCAGTTCTGTATGGCCATCTGATGGAAAACTGCAATCTGTTGCAACTCAAAGCACTCTCCGATGCCTCTCTCGCATGCTCGAAGAAGCCATACATGCTGACCTCACCATCATCACTGCAGATGGCACACTGAATGCTCATAAGGCAGTTTTGTCTGCAAGTTCACCCGTGTTCCAGGGCTTGTATCATCATAAGGGGGACGAAGAAGAGTCATCTACAATCCTCATAGAAGACATGTCACAAGAATCCTGCATGGCCCTTCTGAGTTACTTGTATGGCACAATAAAACAAGAAGATTTCTGGAAGCACAGGCTTGCATTGCTTGGAGCAGCCAATAAATATGACATTAGTGATCTCAAAGATGCCTGTGAGGAAAGCCTATTGGAAGATCTTAACTCAGGAAATGTTCTGGAGAGGCTAAATGAGGCTTGGCTGTACCAGTTGCACAAGTTAAAGAAAGGATGTTTCACCTTCTTATTTGATTTTGGTAAGATATATGATGTTAGAGACGAAATAAATAACTTTTTTCGTCGTGCAGATAGGGAGTTAATGGTGGAGATGTTCCAGGAAATGCTTACATTTTCTAAGTAG 975 0.4328 MADSRVETIARLAQWKIENFGPCSYKKSDPFKLGIWNWYLSIERNRYLYIHLFPEPSRLSKEQPPVARFILRVSSTGSSRKFYISPVHERVLRTCDDFVWPVDTTFLGRFVIDVEFLDLKICPLNGGEASSVWPSDGKLQSVATQSTLRCLSRMLEEAIHADLTIITADGTLNAHKAVLSASSPVFQGLYHHKGDEEESSTILIEDMSQESCMALLSYLYGTIKQEDFWKHRLALLGAANKYDISDLKDACEESLLEDLNSGNVLERLNEAWLYQLHKLKKGCFTFLFDFGKIYDVRDEINNFFRRADRELMVEMFQEMLTFSK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01633 324 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
Rops9g01633 324 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Rops9g01633 324 PANTHER OS08G0495500 PROTEIN-RELATED 1 323 IPR044714 -
Rops9g01633 324 SMART BTB_4 161 259 IPR000210 GO:0005515
Rops9g01633 324 Gene3D Potassium Channel Kv1.1; Chain A 135 288 IPR011333 -
Rops9g01633 324 SUPERFAMILY POZ domain 144 257 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01633 Rops-Chr9 28599339 28604472 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops9g01633 BTB 7.9e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01633 K10523 - gmx:100775687 568.926