Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01627 ATGAACCCTCAACTAACCCTGGTGTTAATGATTGCATTAGCAAGGGTGGGAGCAACTGCAACTGATAAAGCACTACCTGGTTGCAAAGACACATGTGGAAATGTTTCAATTCCATATCCATTTGGCATAGGCAAGTCTTCTAAAACAGGTGAGAACTGTTTCTTGGAGGAAAGCTTGAACCTTACATGCAAGAACAACTCTTTATATAGAGGTAATGGCAATGCTCAAGTTTTGAACATAACCCTTGAAGGCCAATATGAGATATTGTTTTATGTCTCAAAACTTTGCAACGATAGCGAAGATGGAGAAGCTAATCAAGCCTCTCTCCACAGCCCTGCTTTTACCATTTCTAGCAAAGACAACCAGTTCATAAGTGTTGGCTGCAACACTTATGGCTATCTCAATAGCTATCGTAATGAGGAAGTGTATTCAACAGGGTGCATAACAAGATGTAGCAGGTTACCTGATTCGGTAACTGATGGACACTGTTCTGGGATAGGGTGTTGCCAAGTTGATATTCCTTCTGAAATGAAGAATATCACTATACAAACTTACAGCTTTAACTCTATGAACTTCAGTGGTTGTAGCTATTCTTTTGTTGCCAAACGTGGCTTCTATAAATTTTCTGTTAGTCATTTAGAGAATCTTCCCTTCAACATGCTCCCTATGGTTGTTGATTGGACTGTTGGAAACGAGTCATGTGAAATTTTCCAGAAAGGGCTCAGAAAAAGTGTCTGCATGAACAATAGCTATTGTGATGACAGTGATACTAGTTATGGATACCGGTGCAGATGTAAAACTGGTTATGATGGAAATCCATACCATCCGAATGGTTGTCAAGACATTGACGAATGCAAGACAAAAAATCACACATGCATTAGTGATCTTCATTGTCGCAACACTGACGGGTCTTACAAATGCTTTTGTCCTCATGGCCAAGTTGGAAATGGCACACACTTAGAAGGATGCTTACCAATCTCGCAAGAAAGTATTCGAACCAAGTTTGCTATTGGTGCATGTACTGGATTTATAGCTCTGTTGGGGACTTCCTGGTTATACTTAATATATCAAAAAAGGAAACTCATTAAACAAAGAGAAAAATTCTTTGAGCAGAATGGTGGTTTAATTTTACAAAAACGACTATATGCAAGAGAAGACTCCCCCAAAACTGCACAAATTTTCACAGCAGAAGAGTTGAATAAGGCCACCAACAACTATAGTGAGAGCTTAATCATTGGCAAAGGAGGTTATGGTACTGTTTTCAAAGGATTCCTTGCAGATAAAAGGGTTGTTGCTGTCAAGAAGTCCAAAGTAGTGGATCAAAGTCAAGCTGAGCAATTCATTAATGAGGTGATTGTTCTGTCCCAAATCAATCACAGGAATGTGGTAAAACTCTTGGGTTGTTGTTTGGACACTGAAGTCCCATTATTGGTTTATGAATTTGTTAACAATGGTACCCTTTTTGATCATTTACACGATGAGAGCAAGGTTGGTAAATTATCATGGAAGACCCGTCTAAGAATAGCCATAGAGGCAGCTGGAGCTCTATCATATTTGCACTCAGATGCATCCACAACCATTATCCACAGAGATGTCAAGAGTGCCAACATTCTCTTGGATGACTCTTACACTGCCAAAGTTTCTGATTTTGGAGCTTCAAGATTGGTTCCACTTGATCAAGCTGAATTAGCCACAATGGTACAAGGAACTTTTGGGTACTTGGACCCAGAGTACATGCAAACAAGCAGACTCACTGAGAAGAGTGATGTCTATAGCTTTGGTGTAGTGCTTTTAGAACTTCTAACAGGGAAGAAAGCGCTTTCATTTCAGAGGCCAGAAGAGGAAAGAAGTCTTGCCTTGCACTTCCTCTCTTGTTTGGAAGAAGATCGCTTGTTGGAGATTCTTGATTTTGGTCTTCTGAATGAAGAAAATAAGGAGGACATCAAGGAAGTTGCTATTCTTGCAAGCACATGCTTGAGACTTAGAGGGGAGGAGAGGCCTTGCATGAAGGAAGTGGAAATGGAGCTGAAGGGAATAAGGCAAACAGAGAAGCACCCATGGACCAATATAGACCTGAGTTTGGAGGAGTCACAATCCTTGCTTCATGGTGACAGCAGAAGCCATGGAAATACTGAGTATGACAGCTTGAGGGACCATGTACAGATTGCCTTCGATATTGCACGTTGA 2187 0.4065 MNPQLTLVLMIALARVGATATDKALPGCKDTCGNVSIPYPFGIGKSSKTGENCFLEESLNLTCKNNSLYRGNGNAQVLNITLEGQYEILFYVSKLCNDSEDGEANQASLHSPAFTISSKDNQFISVGCNTYGYLNSYRNEEVYSTGCITRCSRLPDSVTDGHCSGIGCCQVDIPSEMKNITIQTYSFNSMNFSGCSYSFVAKRGFYKFSVSHLENLPFNMLPMVVDWTVGNESCEIFQKGLRKSVCMNNSYCDDSDTSYGYRCRCKTGYDGNPYHPNGCQDIDECKTKNHTCISDLHCRNTDGSYKCFCPHGQVGNGTHLEGCLPISQESIRTKFAIGACTGFIALLGTSWLYLIYQKRKLIKQREKFFEQNGGLILQKRLYAREDSPKTAQIFTAEELNKATNNYSESLIIGKGGYGTVFKGFLADKRVVAVKKSKVVDQSQAEQFINEVIVLSQINHRNVVKLLGCCLDTEVPLLVYEFVNNGTLFDHLHDESKVGKLSWKTRLRIAIEAAGALSYLHSDASTTIIHRDVKSANILLDDSYTAKVSDFGASRLVPLDQAELATMVQGTFGYLDPEYMQTSRLTEKSDVYSFGVVLLELLTGKKALSFQRPEEERSLALHFLSCLEEDRLLEILDFGLLNEENKEDIKEVAILASTCLRLRGEERPCMKEVEMELKGIRQTEKHPWTNIDLSLEESQSLLHGDSRSHGNTEYDSLRDHVQIAFDIAR* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01627 728 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 20 683 IPR045274 GO:0007166
Rops9g01627 728 Pfam Protein kinase domain 407 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01627 728 ProSitePatterns Calcium-binding EGF-like domain signature. 281 307 IPR018097 GO:0005509
Rops9g01627 728 ProSiteProfiles Protein kinase domain profile. 406 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01627 728 Pfam Wall-associated receptor kinase galacturonan-binding 28 85 IPR025287 GO:0030247
Rops9g01627 728 Pfam Calcium-binding EGF domain 281 317 IPR001881 GO:0005509
Rops9g01627 728 SMART egfca_6 281 324 IPR001881 GO:0005509
Rops9g01627 728 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Rops9g01627 728 Gene3D Phosphorylase Kinase; domain 1 379 481 - -
Rops9g01627 728 SUPERFAMILY Protein kinase-like (PK-like) 388 675 IPR011009 -
Rops9g01627 728 SMART egf_5 233 280 IPR000742 -
Rops9g01627 728 SMART egf_5 284 324 IPR000742 -
Rops9g01627 728 CDD EGF_CA 281 315 - -
Rops9g01627 728 CDD STKc_IRAK 412 679 - -
Rops9g01627 728 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 298 309 IPR000152 -
Rops9g01627 728 Gene3D Laminin 232 323 - -
Rops9g01627 728 ProSiteProfiles EGF-like domain profile. 281 319 IPR000742 -
Rops9g01627 728 SUPERFAMILY EGF/Laminin 279 317 - -
Rops9g01627 728 FunFam Fibrillin 2 276 321 - -
Rops9g01627 728 SMART serkin_6 406 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01627 728 ProSitePatterns Protein kinases ATP-binding region signature. 412 435 IPR017441 GO:0005524
Rops9g01627 728 FunFam Wall-associated receptor kinase 2 376 481 - -
Rops9g01627 728 Gene3D Transferase(Phosphotransferase) domain 1 482 698 - -
Rops9g01627 728 FunFam Wall-associated receptor kinase 2 482 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01627 Rops-Chr9 28483738 28487421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01627 6 728 Receptor kinase-like Gene Family AT1G21230 45.767 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Rops9g01627 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01627 - - gmx:100819535 929.858