Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01626 ATGGAGCTTGTGAATACTCAAAAGCTACAACAACAGCAGCAACAGCATTTTCATGTGTTGGTGGTGGATGATAGTGTCATAGACAGGATGCTTTTGGAGAGGCTCCTGAGAGATTCTTCATGCAAAGCTACCTTCGTGGACTCTGGAGACAAGGCTCTGAGATATCTTGGCCTGCTTGATGAACTTGATAATGCTTCCTCAATTTTTTCAGAAACATTGCAACAGAAGGGAATCAAAGTGAATTTGATCATGACAGACTACTGCATGCCAGGGATGAGTGGCTATGATTTACTCAAACGAATCAAGGGATCTTCATGGAAAGATGTACCAGTCGTGATTATGTCATCAGAAAATGTACCATCCAGAATCAGCATGTGTTTGGAAGAAGGGGCAGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCAGATTTGAAGAAGCTTCAGCCGTACTTTCTGAAACCCTTTGATAATTCTAGTGAACAAGAATCTGATAACAGTTCTGTAGCTTCTTACAATGACAGTAATGACGACAGCATTAGCAAAAGGAGGGCTATTTCTCCTAAGCATGATTCTAAATTGCAGTTCTTATCAGCAATTGCCACTAGAATATTGCAGTTTTGGAGATCTTCATAA 633 0.4044 MELVNTQKLQQQQQQHFHVLVVDDSVIDRMLLERLLRDSSCKATFVDSGDKALRYLGLLDELDNASSIFSETLQQKGIKVNLIMTDYCMPGMSGYDLLKRIKGSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLQLSDLKKLQPYFLKPFDNSSEQESDNSSVASYNDSNDDSISKRRAISPKHDSKLQFLSAIATRILQFWRSS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01626 210 SMART REC_2 17 148 IPR001789 GO:0000160
Rops9g01626 210 MobiDBLite consensus disorder prediction 157 175 - -
Rops9g01626 210 CDD REC_typeA_ARR 19 147 - -
Rops9g01626 210 Gene3D - 18 194 - -
Rops9g01626 210 PANTHER TWO-COMPONENT RESPONSE REGULATOR 17 185 IPR045279 GO:0009736
Rops9g01626 210 SUPERFAMILY CheY-like 17 152 IPR011006 -
Rops9g01626 210 ProSiteProfiles Response regulatory domain profile. 18 152 IPR001789 GO:0000160
Rops9g01626 210 MobiDBLite consensus disorder prediction 157 183 - -
Rops9g01626 210 Pfam Response regulator receiver domain 19 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01626 Rops-Chr9 28456377 28465947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01626 14 153 Response Regulator Gene Family AT3G57040 61.538 6.05e-59 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops9g01626 Response_reg 1.4e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01626 K14492 - gmx:100790440 290.041