Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01624 ATGTCGTCGCAAAATGAGTCAGAAAACGCGAAGCAGCAACAGCAGAAGAAGAATAAGAAGGTGTTTGATGCAGAAGCATGTTTGATTCTCGTGAAGGAGCTTAGGGGAACCTTCGCTTCTGGCAAAACGCGAAGCTATGAGTGGAGAGTGTCGCAGCTAAACGCACTCTTCAAGCTTATGAACGACAAGGAGCAAGAGATCGTCGAGGCACTTCGAAACGACCTTGATAAGCCGCCGCTTGAAACTGTCGCTTACGAGATTGCCATGTTGAAAAACTCATGTAAAGTTGCAGTCAAGGAATTGAAACATTGGATGGCTCCGGAAAAGGTCAAAACTTCAATCACAACTTATCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGTTAGTCATCTCTGCATGGAACTATCCATTTTTGTTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCACATCATCACTGCTGGCAAAATTGCTCGAAGAATACATGGATAACTCATCTATAAGAGTTGTTGAGGGCGCAGTTGATGAAACATCTGCATTACTGCAGCAAAAGTGGGACAAGATTTTCTACACAGGTAATGGAAGAGTGGGGCGCATTGTGATGACTGCTGCAGCAAAACACCTTACCCCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATCAACTTAGAGGTAGCAACTAGACGGATAATTGCTGGAAAGTGGGGCTGTAACAATGGACAAGCTTGCATTTCTCCAGATTATATTATAACAACAAAAGACTATGCTCCCAAGCTGGTGAATGCCCTAAAGACTGAATTGGAGAAATTTTATGGAAAGAACCCATTGGAATCAAAAGATTTGTCCCGAATTGTGAATTCGAATCACTTTGCTCGCTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGGGAAAAGGATGAAAGAAAATTGAGGATTAGCCCCACTGTTCTATTGGATGTCCCCCGAGATTCTCTGATAATGAGTGAGGAGATATTTGGTCCTTTACTTCCCATCCTAACGGTCGATAAATTGGAAGAATGCTTTGATGTGATCAGTTCAGGACCAAAGCCTCTAGCTGCATATATATTTACAACCAACAAGAAGCTCAAGGAGCAGTTTGTTATGAGTGTTTCTGCTGGCGGTTTGGTTGTAAATGACACTACATTACATCTTGCAGTTCATACTTTGCCATTCGGAGGAGTTGGTGAGAGTGGAGTGGGTGCTTACCATGGGAAATTCTCATTTGATGCTTTTAGCCACAAAAAAGCTGTTCTTTATCGCAGTTTCATGGGTGATGCATCAATAAGGTACCCACCATACACAAATACAAAGATGAGATTGCTGAAGGCTCTTGTTGGTGGTGGCATACTTGGTATAATTCGTGCCCTGTTTGGATGGTCCTAG 1500 0.428 MSSQNESENAKQQQQKKNKKVFDAEACLILVKELRGTFASGKTRSYEWRVSQLNALFKLMNDKEQEIVEALRNDLDKPPLETVAYEIAMLKNSCKVAVKELKHWMAPEKVKTSITTYPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMTAAAKHLTPVVLELGGKSPVVVDSNINLEVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVNALKTELEKFYGKNPLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVYGGEKDERKLRISPTVLLDVPRDSLIMSEEIFGPLLPILTVDKLEECFDVISSGPKPLAAYIFTTNKKLKEQFVMSVSAGGLVVNDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFMGDASIRYPPYTNTKMRLLKALVGGGILGIIRALFGWS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01624 499 PIRSF ALDH 6 489 IPR012394 GO:0006081
Rops9g01624 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 236 436 IPR016163 GO:0016620
Rops9g01624 499 FunFam Aldehyde dehydrogenase 236 436 - -
Rops9g01624 499 Coils Coil 53 73 - -
Rops9g01624 499 Pfam Aldehyde dehydrogenase family 35 456 IPR015590 GO:0016491
Rops9g01624 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 36 454 IPR016162 GO:0016491
Rops9g01624 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 232 239 IPR029510 GO:0016491
Rops9g01624 499 CDD ALDH_F3FHI 30 458 - -
Rops9g01624 499 PANTHER ALDEHYDE DEHYDROGENASE 29 486 IPR012394 GO:0006081
Rops9g01624 499 FunFam Aldehyde dehydrogenase 35 239 - -
Rops9g01624 499 SUPERFAMILY ALDH-like 31 472 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01624 Rops-Chr9 28423044 28435877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01624 87 497 Aldehyde Dehydrogenase Gene Family AT1G44170 75.912 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01624 K00128 - gmx:100778722 842.032