Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01612 ATGAGGACCGTTTTCTCAGGTTCCCGATTTCTTCTCAAATATAGCTGGCATTCAAACCCTAACCTGAGGAGTAGTTTCCGTGTGTTTGGAATGGACGCTGCAGCTAGGGTTTCCGATGGTGTTGTTCGCTTCCCTTTATCTGCATCCAGCGCTTTGGTCATTCAGAAAGGAGACATTACCAAATGGTCCATCGATGGTTCCACTGACGCAATAGTAAATCCTGCAAACGAGAGAATGCTTGGAGGTGGTGGTGCAGATGGAGCTATACATAGGGCTGCAGGCCAAGATCTTCTTCGCGCCTGCCAAAATGTTCCAGAAGTCAGGCCGGGAGTTCGCTGCCCTACGGGGGAAGCCAGGATCACACCAGGTTTTAAGCTGCCTGTTTCTCATGTTATTCATACTGTTGGCCCAATCTTCAATGCTGATAGTAATCCTGCCGCCTCTCTGGCAAGTGCTTACAGGAATAGTTTGAGGGTTGCAAAAGAGAACAACATTCAGTATATAGCATTCCCAGCCATATCATGTGGTGTCTATGGATACCCTTAG 546 0.4799 MRTVFSGSRFLLKYSWHSNPNLRSSFRVFGMDAAARVSDGVVRFPLSASSALVIQKGDITKWSIDGSTDAIVNPANERMLGGGGADGAIHRAAGQDLLRACQNVPEVRPGVRCPTGEARITPGFKLPVSHVIHTVGPIFNADSNPAASLASAYRNSLRVAKENNIQYIAFPAISCGVYGYP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01612 181 SMART YBR022w_8 51 181 IPR002589 -
Rops9g01612 181 Pfam Macro domain 72 181 IPR002589 -
Rops9g01612 181 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 51 181 - -
Rops9g01612 181 SUPERFAMILY Macro domain-like 51 181 IPR043472 -
Rops9g01612 181 Gene3D Leucine Aminopeptidase, subunit E, domain 1 39 181 IPR043472 -
Rops9g01612 181 CDD Macro_OAADPr_deacetylase 52 181 - -
Rops9g01612 181 ProSiteProfiles Macro domain profile. 39 181 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01612 Rops-Chr9 28158214 28161375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01612 57 162 C2H2 Transcription Factor Family AT5G01310 33.613 2.83e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01612 K23518 - gmx:100811169 287.73