Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01591 ATGGCCTTCCTCAAATTTCCATTCCATTTCCTCCTCTTGCTCTGCGTGTCACTACCCTCACAGGTAATTTCCCAGGCCACAAGCGCCGAGCAAACAATCCTGCTGAACGTTAAACATAAACTCGGCGATCCACCGTCGCTCCAATCATGGAACACGTCATCGCCGCCGTGCAACTGGCCGGAAATCCACTGCACCGGTGGCATCGTCACGGAGCTCATCCTCTCCGGAAAAAACATCTCCGGTGAGCTCCCGGTGGAAATCTGTGACCTGAAGAACCTCATGCGGCTCGACCTCTCCGACAACAACATCATTGGCAAGTTCCCGACATTCTTGTCCAACTGCTCCAACCTTCAACTCCTTGACCTGTCTCAGAACTACTTCACCGGTCGAATACCAAACGACATTGTCAAACTCAGAAACCTAAGATACCTCGACCTCGGTGGAAACAACTTCTCTGGTGACATTCCGGCCGAAATAGGGAACCTTTCCAAGTTACAAACGCTTCTCCTCTACAGGAACGAGTTCAACGGTACGTTTCCGAAGGAAATCGGAAACTTGATGAATCTCCAGGTATTAGGCTTGGCCTTTAACAAGTTTTTGGAAACGACACTGCCGTTTGAGTTTGGTAACCTGATGAACTTGACTGTCATGTGGATGCCACAGTGTCGTTTAATCGGAGAGATACCAGAAAGTTTCATCAATCTCACAAGTCTCGTGCGACTTGACTTGTCGTTCAATAGTTTAACAGGGAACATCCCTAATGGTTTGTTCTCGTTAAGGAACTTGCAATATTTGTTACTCTACCACAACGAGTTAACTGGCGAATTACCCGATTCAATACAAGCTTTGAATTTGACACAAATTGATTTGTCAATGAATAATTTAACGGGTTTGATACCTGAAGATATTGGGAAGTTGGAGAATTTGACTGTGTTGCATTTATTTTCGAATCAGTTGTCTGGTCAGATTCCAAGAAGTTTGGGCCTTAGCCCAAAGATGAAGGACTTGAAGGTTTTTAGCAACAAGTTGAATGGAACTCTGCCTCCAGAACTAGGCCTATATTCGAAGCTTGAATCATTTGAAGTTGCTGACAATCAACTAAGTGGTGGGTTGCCTAAAAATTTGTGTGCTGGTGGTGCTTTACAAGGTGTGATTGCTTTTTCTAACAACTTCACTGGTGAATTGCCGGAATGGTTGGAGAATTGTACTACCCTGCGCACAGTTCAGCTTTTTAATAACAAGTTTTATGGTAAGGTTCCTTTGGGTTTGTGGACTTTAAGGAACTTATCAACCTTGATGTTGAGTAATAACTCATTTTCTGGTGAGCTTCCTAATAAGTTAGCTTGGAATATGTCTAGACTAGAGATCAGGAACAACAAGTTTTCAGGTCAAATATCTCTTGGGATTTCTTTAGCTGCTAATCTAGTAGTTTTTAATGCGAGAGACAACCAACTTTCGGGTCAAATTCCAAGGGAATTGACCAGACTTTCTAAGCTTAATACACTCATGCTTGATGGTAATCAGCTTTCAGGTGCAATTACATCAGATATAATCTCATGGCAGTCACTGAACACTTTAAGTCTTTCAAGAAACAAAATTTCTGGCCAAATTCCTGAAGCTATGTGTAATCTTCCTGACCTTGTTTACTTGGACTTGGCTGAAAATAACATATCTGGTGAAATCCCACCTCAGCTTGGTAACTTGAGGCTTATTTTTCTCAACCTGTCATCCAATAAGTTTTCAGGGAATATCCCTGATGAGTTCAATAACCTTGCATATGAAAACAGTTTCGTGAATAACCCCAATCTCTGTGCTTATAATCCAAATCTCAACCTTTCTAGCTGTTTGACCAAAACCCCAAAACCAAGCAAATCTTCTTCAAAAAAATACCTTTCCCTGATTCTAGTTCTAACCATTGCTGTATTGTTGCTAGCCACTGCCTTCCTTGCTTTCTATAAGTTAACAAGAAACTGGGGCAAGAAGCACTGTGGGGGTGGCCTTTCAACATGGAAGCTTACTTCATTCCAGAGGCTAGACTTCACTGAATTGAATATCTTCTCAAGTTTGACAGATGATAACCTTATAGGGAGTGGAGGGTTTGGGAAAGTTTACCGGGTTGCTTCGGATTGTTCAGGTGAGTTTGTTGCTGTGAAAAAGATTTGGAATTGCAGGAATCTTGATAAAAGGTTGTATAAAGAGTTTATGGCTGAGGTTCAAATCCTTGGCTCCATTCGTCATTCCAATATAGTGAAGCTTTTGTGTTGCTTTTCAAGTGAGAACTCCAAGCTTCTTGTCTATGAATACATGGAAAACCAGAGCCTGAACAAATGGCTTCATGGAAGAAAGAAGAAAGTTTCAGCTACTGGGTTGAGTTCACCTAACAATAATCATCTGCTCTTGAACTGGCCCACGAGGTTGAAGATTGCCATTGGAGCTGCACAAGGCCTGTGTTACATGCACCATGAATGCTCACCTCCAATCATCCATCGAGATGTCAAGTCTAGCAATATATTGATGGACTCTGAGTTCAGGGCCAGTATTGCAGATTTTGGTCTTGCCAAGATGTTGGCAAAGCCAGGGGAGCTACATACTATGTCCAATATAGCAGGGTCTTTCGGCTACATTCCACCAGAATATGCCTATTCAACAAAGATTAATGAGAAAGCTGATGTATATAGTTTTGGGGTTGTACTCCTTGAGCTTGTTACTGGGAAAGAGCCTATTTGTGGAGGACAGCATACAAGCAGCCTTGTAGATTGGGTGATGCAGCATTATAGTGAAGGGAAGTGCATCACTGAAGCACTGGATGAAGAAATCAGAGAAACATGTTACGTGGAAGAGATGACCACTGTCTTTAAATTAGGCCTTGTTTGCACAAGCAGATTACCCTCAAACAGGCCTTCCATGAAAGAGATTTTGCAAGTTCTTCGTCAGTGTTGTTGTCCTCTGAGTTATGAACGAAGTAGAAGAGTGGGAATTGGGTTTGATAATGCTCTCCTTCTTGGCAATACCACGTACATTTCTAGTTACAAGGATAGTAATAAGGCTATAAGCGAAAATGAAGAAAGCTGTTTCTATAGCATGTAA 3087 0.4214 MAFLKFPFHFLLLLCVSLPSQVISQATSAEQTILLNVKHKLGDPPSLQSWNTSSPPCNWPEIHCTGGIVTELILSGKNISGELPVEICDLKNLMRLDLSDNNIIGKFPTFLSNCSNLQLLDLSQNYFTGRIPNDIVKLRNLRYLDLGGNNFSGDIPAEIGNLSKLQTLLLYRNEFNGTFPKEIGNLMNLQVLGLAFNKFLETTLPFEFGNLMNLTVMWMPQCRLIGEIPESFINLTSLVRLDLSFNSLTGNIPNGLFSLRNLQYLLLYHNELTGELPDSIQALNLTQIDLSMNNLTGLIPEDIGKLENLTVLHLFSNQLSGQIPRSLGLSPKMKDLKVFSNKLNGTLPPELGLYSKLESFEVADNQLSGGLPKNLCAGGALQGVIAFSNNFTGELPEWLENCTTLRTVQLFNNKFYGKVPLGLWTLRNLSTLMLSNNSFSGELPNKLAWNMSRLEIRNNKFSGQISLGISLAANLVVFNARDNQLSGQIPRELTRLSKLNTLMLDGNQLSGAITSDIISWQSLNTLSLSRNKISGQIPEAMCNLPDLVYLDLAENNISGEIPPQLGNLRLIFLNLSSNKFSGNIPDEFNNLAYENSFVNNPNLCAYNPNLNLSSCLTKTPKPSKSSSKKYLSLILVLTIAVLLLATAFLAFYKLTRNWGKKHCGGGLSTWKLTSFQRLDFTELNIFSSLTDDNLIGSGGFGKVYRVASDCSGEFVAVKKIWNCRNLDKRLYKEFMAEVQILGSIRHSNIVKLLCCFSSENSKLLVYEYMENQSLNKWLHGRKKKVSATGLSSPNNNHLLLNWPTRLKIAIGAAQGLCYMHHECSPPIIHRDVKSSNILMDSEFRASIADFGLAKMLAKPGELHTMSNIAGSFGYIPPEYAYSTKINEKADVYSFGVVLLELVTGKEPICGGQHTSSLVDWVMQHYSEGKCITEALDEEIRETCYVEEMTTVFKLGLVCTSRLPSNRPSMKEILQVLRQCCCPLSYERSRRVGIGFDNALLLGNTTYISSYKDSNKAISENEESCFYSM* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01591 1028 Gene3D Ribonuclease Inhibitor 202 448 IPR032675 -
Rops9g01591 1028 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 380 619 - -
Rops9g01591 1028 SMART LRR_typ_2 138 162 IPR003591 -
Rops9g01591 1028 SMART LRR_typ_2 544 568 IPR003591 -
Rops9g01591 1028 SMART LRR_typ_2 90 114 IPR003591 -
Rops9g01591 1028 SMART LRR_typ_2 496 520 IPR003591 -
Rops9g01591 1028 SMART LRR_typ_2 186 210 IPR003591 -
Rops9g01591 1028 SMART LRR_typ_2 306 330 IPR003591 -
Rops9g01591 1028 SMART LRR_typ_2 426 450 IPR003591 -
Rops9g01591 1028 SMART LRR_typ_2 235 259 IPR003591 -
Rops9g01591 1028 Gene3D Ribonuclease Inhibitor 29 137 IPR032675 -
Rops9g01591 1028 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 280 375 - -
Rops9g01591 1028 FunFam Kinase family with leucine-rich repeat domain-containing protein 769 991 - -
Rops9g01591 1028 Gene3D Ribonuclease Inhibitor 449 637 IPR032675 -
Rops9g01591 1028 Gene3D Transferase(Phosphotransferase) domain 1 769 987 - -
Rops9g01591 1028 Pfam Leucine rich repeat N-terminal domain 32 64 IPR013210 -
Rops9g01591 1028 SUPERFAMILY L domain-like 42 372 - -
Rops9g01591 1028 ProSiteProfiles Protein kinase domain profile. 689 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01591 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Rops9g01591 1028 ProSitePatterns Protein kinases ATP-binding region signature. 695 719 IPR017441 GO:0005524
Rops9g01591 1028 Pfam Protein kinase domain 691 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01591 1028 SUPERFAMILY L domain-like 284 538 - -
Rops9g01591 1028 Gene3D Ribonuclease Inhibitor 138 201 IPR032675 -
Rops9g01591 1028 Gene3D Phosphorylase Kinase; domain 1 671 768 - -
Rops9g01591 1028 CDD STKc_IRAK 695 976 - -
Rops9g01591 1028 FunFam Receptor-like protein kinase HSL1 669 768 - -
Rops9g01591 1028 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 27 183 - -
Rops9g01591 1028 SMART serkin_6 689 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01591 1028 Pfam Leucine rich repeat 498 557 IPR001611 GO:0005515
Rops9g01591 1028 Pfam Leucine rich repeat 92 151 IPR001611 GO:0005515
Rops9g01591 1028 SUPERFAMILY Protein kinase-like (PK-like) 683 976 IPR011009 -
Rops9g01591 1028 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 234 978 - -
Rops9g01591 1028 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01591 Rops-Chr9 27803066 27806835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01591 16 978 Receptor kinase-like Gene Family AT5G25930 56.463 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops9g01591 Pkinase 7.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01591 - K00924 gmx:100790817 1498.03