Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01586 ATGTTGACAGTGGCATGCTCATCAAAGGGGTCTTATGATGACAGCAACAAAGCTCTATTGTGGAGCAAGCCATATGCTTGTAGGAAGACATTGGCAGACAACAGGCCACGTATCAGAGGAAGATTTGCAAGGAATGATGAAATAGTAATGAACTCTCATGTTCAATGGAGCCATATTGGTATCGGTGAGGAAGAAGATGAGGAAGATGAGAATTGGGCCAATGGCAGTTCACATGTGATTGGCTTGGCTCCAATTTTCCCAGTTCTGATAAAACTCAGAGAATTTCCAACCATTGCTTGTGTTGTGCTGCAACTAAAGCCATCAACTTTGTCTTGTAATCCCATAACCATAACCATTACCATCCTCATAGTCAAAAGTGAAAACCTTAAAAACATGGTAATGTGGGTATTTGGTTATGGTTCCTTGATCCATAAAGCAGGGTTTCACTACGACGAACGTGTTGTTGGTTTCATCAAAGGTTATCGACGTGTCTTCTACCAAGGCTCTACTGATCACAGAGGGACCCCTGAGTTCCCTGGAAGAACAGTGACACTGGAACCTGCTGAAGGAGAACTATGTTGGGGAGCTGCTTACAAGGTCTCAAAGAAAGAAGATCAAGAAGTTGCATTAACGCATCTGGAAGTGAGGGAGAAGCAATATGACAAGAAGGAATATGTAGATGTTTTCACTGAGCTTAATGCTACAACACCAGCCATTTCTGGGGCGTTGGTATATATAGCATCTCCAGACAAGAAAGTTAACGTAAATTATTTAGGCCCTGCTTCTGTTGAAGATATTGCGAGGCAAATAATTCAGGCTGAAGGTCCCACAGGACCTAATAGAGAGTATCTTTTCCTACTTGAAAAGGCTCTCCTTGAAATAGGATGCAAAGACCAGCATGTTATTGATCTTGCAAATGAAGTCAGGCGTATTCTTTCAGAGACACACTGA 951 0.4227 MLTVACSSKGSYDDSNKALLWSKPYACRKTLADNRPRIRGRFARNDEIVMNSHVQWSHIGIGEEEDEEDENWANGSSHVIGLAPIFPVLIKLREFPTIACVVLQLKPSTLSCNPITITITILIVKSENLKNMVMWVFGYGSLIHKAGFHYDERVVGFIKGYRRVFYQGSTDHRGTPEFPGRTVTLEPAEGELCWGAAYKVSKKEDQEVALTHLEVREKQYDKKEYVDVFTELNATTPAISGALVYIASPDKKVNVNYLGPASVEDIARQIIQAEGPTGPNREYLFLLEKALLEIGCKDQHVIDLANEVRRILSETH* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01586 316 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 132 250 IPR036568 -
Rops9g01586 316 Pfam CCT motif 25 45 IPR010402 GO:0005515
Rops9g01586 316 ProSiteProfiles CCT domain profile. 3 45 IPR010402 GO:0005515
Rops9g01586 316 CDD GGCT_like 136 247 IPR013024 -
Rops9g01586 316 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 132 314 IPR006840 GO:0006751|GO:0061928
Rops9g01586 316 Pfam ChaC-like protein 134 310 IPR006840 GO:0006751|GO:0061928
Rops9g01586 316 Gene3D - 124 314 - -
Rops9g01586 316 FunFam Gamma-glutamylcyclotransferase 133 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01586 Rops-Chr9 27678793 27700142 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops9g01586 ChaC 6.9e-52 CL0278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01586 K22596 - gmx:100305985 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01586 9 27678793 27700142 Rops9g01586 9 27678793 27700142 ECH