Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01585 ATGAGTGATCCAAATATATGTGATAGGTTGAGCAAGGGACTCCGCAAGGTTAAGCCTTACCTTGCTATGATATCCCTTCAATTTGGTTACGCTGGAATGTATATAATCACCATGGTTTCATTTAAGCATGGCATGAGTCATTGGGTACTCTCGGTGTATCGTCATGTCTTTGCCACTATCGTCATGGCCCCTTTTGCTCTTGTTCTTGAAAGGAAAATAAGGCCAAAAATGACTCTCCCCATCTTCTTGAGGTTGGCTGTGCTTGGTTTCCTTGAGCCAGTACTTGATCAAAATTTGTACAACATGGGAATGTCGTACACCTCAACAACATTTGCATCGGCCACCGTTAATGTCCTCCCAGCCATTACTTTTATTATGGCACTCATTTTCAGGTTAGAGACAGTGAACTACAAAAAAATACACAGCGTAGCCAAGGTAATTGGAACTGTGGTAACAGTCTCAGGAGCCATGGTTATGACTTTGTACAAGGGTCCTGAACTTCAGATCATAAAGGGACAAGCAGCAGGACACAATGGCAGTTCCAGCACTGAGCCTTCTGATCAACACTGGGTGCTTGGCACAATAATGCTCATAGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATCTTGCAATCTTTCACATTGAAGATGTACCCAGCAGAGCTCTCTGTCACAGCTTGGATTTGCTTCTTGGGAATTTTTGAGGGTGCAATTGCATCATTTATATTTGAACGTGACATGAGTGTTTGGTCCTTAGGCTGGGACTCTAGGCTTCTAGCTTGTGTTTATTCTGGGCTGGTGTGTTCTGGAATGGCATACTATGTACAAGGAGTGGTGACCAGGGAACGTGGACCTGTGTTTGTGACTTCTTTCAGCCCTCTGTGTATGATAATCACTGCTGCATTGGGTTCCATTGTTTTGGCTGAGCAAGTTCATCTGGGAAGTATAATTGGAGCTATTATCATTGTTTGTGGGCTTTATACTGTGGTATGGGGAAAAAGCAAAGACCCTCTGAACACAGCAGATGCAGGGAAAATTGAGGGTCAAGAATTGCCAATTAGAAAATCAGGATCAGACATTTTTGAAAATATTGAGGTCAATGTTCCTGGTGAGATGAACAGGGCAGAAAGGTATTTCCAACCATCAACAAGATCATAA 1158 0.4309 MSDPNICDRLSKGLRKVKPYLAMISLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVFATIVMAPFALVLERKIRPKMTLPIFLRLAVLGFLEPVLDQNLYNMGMSYTSTTFASATVNVLPAITFIMALIFRLETVNYKKIHSVAKVIGTVVTVSGAMVMTLYKGPELQIIKGQAAGHNGSSSTEPSDQHWVLGTIMLIASCGGWASFFILQSFTLKMYPAELSVTAWICFLGIFEGAIASFIFERDMSVWSLGWDSRLLACVYSGLVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQVHLGSIIGAIIIVCGLYTVVWGKSKDPLNTADAGKIEGQELPIRKSGSDIFENIEVNVPGEMNRAERYFQPSTRS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01585 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Rops9g01585 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 335 - -
Rops9g01585 385 PANTHER WAT1-RELATED PROTEIN 18 336 IPR030184 GO:0016020|GO:0022857
Rops9g01585 385 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Rops9g01585 385 Pfam EamA-like transporter family 22 152 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01585 Rops-Chr9 27666601 27670484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01585 14 360 Nodulin-like Gene Family AT1G44800 64.023 1.36e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01585 - - tpra:123903307 626.32