Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01584 ATGGGTGAACTATCATGTTGTGAGAAGGTGCATTCGTGGCTCAGCAATTCAAAAGCATATTTGGTAATAATAAGCTTACAATTTGGCTCAGCTGGCATGTATGTTATCACCATGGATGCTCTCAATAAGGGCTTGAGTCATTATGTGTTCGTTGTTTACCGTAATGTCATCGCCACTCTAGCTCTTGCCCCCTTTGCATTTTTTCTTGAAAGGAAAATTAGGCCCAAGATGACAGCTCGGATATTTTCAGAGATTATGGCACTGGCTTTTGTCGAGATAATACTTGATCAATGCTTCACCTTCTTGGGGATGAAGTTAACATCAGCATCTTTTGCATCTGCCGTGATGAATTCCGTACCTTCCATTACCTTTGTACTAGCAATCATTTTTCGATTGGAGCGCATGAAAATTAAGGAGTTAGGATGTCAAGCCAAAGTAATTGGCACTGTGGTAACTCTTGGAGGAGCTTTTCTAATGGCACTATACAAAGGTCCAGTTGTTAATGTTACTGGGTCATCAACGAGCCATGTGAGCCATCATGAGAATGTGAATGACCCCACTGGTGACCATTGGCTCATTGGTGCATGTTTCCTCCTCATAGGTTGTGCTGGCTTCTCTGCTTTCTACATATTACAAGCCTTAACATTGAGAAAGTACCCAGCAGAGATGTCCCTTGCCACGTGGATTTGCTTTATAGGTGCACTTCAAAGCAGTGCAGTAACTATTTTCATGGAGCGCAATAACCCTCATGCCTGGTCTCTTGGCTTGGATTCTAGACTCTTTGCTTGTGCATACTCGGGAATAGTGACTTCAGCAATCCAATTTTACGTGCAAGGCTCGGTTATCAAAAGTAAAGGCCCAGTGTTTGTGACTGCTTTTAATCCCCTGCGTATGATCATAGTCACAGCCTTGGCCTGCATCCTTCTCTCAGAGAAACTCTACTTTGGAAGCCTTATTGGAGGAGTAGTTGTGGTTATGGGACTTTATCTAGTTGTATGGGGAAAATCCAAAGATCAAAAACGTCTCATGCCACCACCATCCCCTGAAAAGGAGATAACCTTGCAAGGCCAACAACAGCTACCAGTTACTGTCCCCAAAATTAATAGCAATGAAAATAAAGCTCAATTGGTCATAATTGGAGATAAAACCAATGATGTGGAAGCCAGAGGATCAAGTTCAGAGAACCAGTGA 1191 0.4274 MGELSCCEKVHSWLSNSKAYLVIISLQFGSAGMYVITMDALNKGLSHYVFVVYRNVIATLALAPFAFFLERKIRPKMTARIFSEIMALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIKELGCQAKVIGTVVTLGGAFLMALYKGPVVNVTGSSTSHVSHHENVNDPTGDHWLIGACFLLIGCAGFSAFYILQALTLRKYPAEMSLATWICFIGALQSSAVTIFMERNNPHAWSLGLDSRLFACAYSGIVTSAIQFYVQGSVIKSKGPVFVTAFNPLRMIIVTALACILLSEKLYFGSLIGGVVVVMGLYLVVWGKSKDQKRLMPPPSPEKEITLQGQQQLPVTVPKINSNENKAQLVIIGDKTNDVEARGSSSENQ* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01584 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Rops9g01584 396 PANTHER WAT1-RELATED PROTEIN 20 347 IPR030184 GO:0016020|GO:0022857
Rops9g01584 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 337 - -
Rops9g01584 396 Pfam EamA-like transporter family 21 159 IPR000620 GO:0016020
Rops9g01584 396 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01584 Rops-Chr9 27642308 27646353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01584 14 385 Nodulin-like Gene Family AT2G39510 43.158 1.75e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01584 - - gmx:100813852 608.216