Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g01577 | ATGCCAGTGAACCGTGGCCAAGGTCAACCCACAAGGTGGTATCAGCTATGCTTTGCTCCTACTAGTGGAGATAGTTCAGATGATTCAGACACAGAATCTGTAGTACTACCTCCCAGTACTCCAATTCCAACTAGTACATGGCAAGAACTTTCTCCACCAGAGTCGCCACCTTTTCTACTGCCACCACCACCACTGCCTGTGGAGTTCTGGGATGATGAATATGATCTTGAATCACCACATGGTATATATCAACCTCCTAGTCCAAGTCTTGCATTTATGTATCATGATCCACTTGATTCCTCTTCTGTGGTTGATCCTGAAGCTGATCAAAGTGACTTCTCTCAGGTTCTTCCGGATGGTATCATCAATGCTATTAGAAGGGTGAGAATCTCAGAGTTGGATGAGAGAGATAGACAGTCTCATAATAACTGTCCCATTTGCATGGAGGAGTTTAAAGTGGGTGACCAAGCATGTCATTTACCATGCATCCATGTCTACCATTCTGAATGCATTCATCGTTGGCTTAACAACAACAGAACCTGTCCTATTTGTAGGCTTGAGTTGGATGATTTGGAAGGTCAAGGTGGTTGCTCTTATAGCATAGTGGATAATAGTTTGGACCCTGAACCTCCACCACCACCACCTGTAACTCATATAGACTGGGATTTCTTTTTTCATTACTTGGAGGGTTCACAAATTTCAGAAGGTGACAACTCGGATGAAGATGGCTATCATAGTGCATGTGACGAGCTAAGTGATTCTCATGAAGATGGAGGTATAGTTGGAGCTTCTTAG | 795 | 0.4365 | MPVNRGQGQPTRWYQLCFAPTSGDSSDDSDTESVVLPPSTPIPTSTWQELSPPESPPFLLPPPPLPVEFWDDEYDLESPHGIYQPPSPSLAFMYHDPLDSSSVVDPEADQSDFSQVLPDGIINAIRRVRISELDERDRQSHNNCPICMEEFKVGDQACHLPCIHVYHSECIHRWLNNNRTCPICRLELDDLEGQGGCSYSIVDNSLDPEPPPPPPVTHIDWDFFFHYLEGSQISEGDNSDEDGYHSACDELSDSHEDGGIVGAS* | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g01577 | 264 | SUPERFAMILY | RING/U-box | 123 | 190 | - | - | |
Rops9g01577 | 264 | Pfam | Ring finger domain | 142 | 185 | IPR001841 | - | |
Rops9g01577 | 264 | MobiDBLite | consensus disorder prediction | 17 | 52 | - | - | |
Rops9g01577 | 264 | MobiDBLite | consensus disorder prediction | 235 | 264 | - | - | |
Rops9g01577 | 264 | PANTHER | SI:CH211-59O9.10 | 122 | 190 | - | - | |
Rops9g01577 | 264 | SMART | ring_2 | 144 | 184 | IPR001841 | - | |
Rops9g01577 | 264 | MobiDBLite | consensus disorder prediction | 238 | 256 | - | - | |
Rops9g01577 | 264 | CDD | RING-H2_PA-TM-RING | 144 | 185 | - | - | |
Rops9g01577 | 264 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 106 | 190 | IPR013083 | - | |
Rops9g01577 | 264 | ProSiteProfiles | Zinc finger RING-type profile. | 144 | 185 | IPR001841 | - | |
Rops9g01577 | 264 | MobiDBLite | consensus disorder prediction | 17 | 56 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g01577 | Rops-Chr9 | 27454617 | 27455411 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g01577 | 69 | 189 | C3H Transcription Factor Family | AT1G68180 | 35.156 | 1.27e-16 | 75.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g01577 | - | K11982 | ccaj:109817940 | 216.083 |