Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01574 ATGGACATGGACATGGACATGGTCATGGATGGAGTCCATTATCTCCTCGACTTCTCCGGCTACACCACCACCACCCCTACTTCCGACGACGCGGCCGCCGGTAGCTGGTCCCCCGTCATCGACTGGGAATCCTTCACCGCCGGCCAAGACGACTTCCACGACCTCATCGACTCCATCATGGACGAGAACATCACCGCCGATATTCTCACCTCCGATCAAGAAGAACCAACCGGAGAAGGGTCCAACTCCGCCACCGTAACAGAGGAGGAGGACGACGAAGATAACCAAAAGGGCCTCCGCCTGGTGCACCTCCTCATGGCGGCGGCGGAGGCCCTCACCGGCACCGACAAGAGCCACGACTTGGCTCGAGCGATATTGGTTCGGCTCAAGGAATTGGTGTCCCACACCCACGGCACCACCACCACCACCACCACCATGGAGAGGCTCGCCGCGTATTTTACGGACGCCCTCCAAGGTTTGCTAGATGGCGCCGTGGGTGCGCACATCACCACCACAACACTTATCAGTGGGACCCACCAAACGGACATGCTGGCTGCGTTTCAGCTTCTTCAAGACATGTCCCCTTACATCAAGTTTGGCCACTTCACCGCCAACCAGGCCATACTCGAAGCCATGGCCCACGAACGTAGGGTCCACATAATTGATTTTGACGTCATGGAAGGGGTCCAATGGGCTTCACTAATCCAGGCTTTTGCATCTAAAAAAGACGGCCCACCGGGCCCACACCTTCGCATCACCGCATTGTCTAGAACCTCTTGTCGTGGAACTGGACGGAGATCCATAGCTACCGTCCAAGAAACTGGACGGAGGTTAACGGCGTTTGCGGCCTCCGTTGGGCAACCGTTTTCGTTTCATCAGTGTAGGTTAGACCCTGATGAAACGTTTCGACCTTCTTCTTTGAAACTGGTTCGTGGTGAGGCTTTGGTGTTTAACTGTATTTTGCACTTGCCTCATTTAAACTACCGGGCCCACGATTCGGTTGTTTCGTTCTTGAATGGTGCAAAGGAGTTAAGCCCGAGGCTTGTGACTTTGGTGGAGGAGGAAGTGGGGCCCGGTGGGGACGCGGGCTTCGTCGGCCTGTTTATGGATTCGCTTCATCGTTACTCGGCGGTTTATGATTCGCTTGAGGCTGGGTTTCCGATGCAAAGGTGGGCCCGGGCTTTGGTGGAGAGAGTGTTCTTGGGCCCAAGGATAACGGGCTCGGTGGCCCAGATATATCGGACTGGTGAAGAGGAGGACAGGGGGTCGTTGGGGGACTGGTTGGGTGTGGGGGGGTTCATGGGGGTTCCCATAAGCTTTGCTAATCATTGCCAAGCGAAGCTGTTATTGGGTTTATTTAATGATGGGTATAGGGTGGAGGAGTTGAATAATAATAAGTTGGTGTTGGGTTGGAAATCAAGGCGTTTGTTTTCGGCCTCTGTTTGGACTTCTATTTCTTCAGACTCTGATTTCTAG 1476 0.5447 MDMDMDMVMDGVHYLLDFSGYTTTTPTSDDAAAGSWSPVIDWESFTAGQDDFHDLIDSIMDENITADILTSDQEEPTGEGSNSATVTEEEDDEDNQKGLRLVHLLMAAAEALTGTDKSHDLARAILVRLKELVSHTHGTTTTTTTMERLAAYFTDALQGLLDGAVGAHITTTTLISGTHQTDMLAAFQLLQDMSPYIKFGHFTANQAILEAMAHERRVHIIDFDVMEGVQWASLIQAFASKKDGPPGPHLRITALSRTSCRGTGRRSIATVQETGRRLTAFAASVGQPFSFHQCRLDPDETFRPSSLKLVRGEALVFNCILHLPHLNYRAHDSVVSFLNGAKELSPRLVTLVEEEVGPGGDAGFVGLFMDSLHRYSAVYDSLEAGFPMQRWARALVERVFLGPRITGSVAQIYRTGEEEDRGSLGDWLGVGGFMGVPISFANHCQAKLLLGLFNDGYRVEELNNNKLVLGWKSRRLFSASVWTSISSDSDF* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01574 491 ProSiteProfiles GRAS family profile. 92 483 IPR005202 -
Rops9g01574 491 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 84 479 IPR005202 -
Rops9g01574 491 MobiDBLite consensus disorder prediction 69 84 - -
Rops9g01574 491 Pfam GRAS domain family 101 483 IPR005202 -
Rops9g01574 491 MobiDBLite consensus disorder prediction 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01574 Rops-Chr9 27343153 27344628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01574 81 486 GRAS Transcription Factor Family AT3G54220 34.532 3.21e-52 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops9g01574 GRAS 4.3e-96 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01574 - - gmx:100787926 635.18