Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01564 ATGGATGAGAAGCCTAACGTTTCCCTCTCACCCACTTCTTCTTCTTTTCTCCGCCAAGTCCAAGCAGCCCTCGGCCGCCACCACCGTGCTGTCGGTCCGACTCAATCAGATAGCATAAGACCAAAGCGCTCCACGGTTGGTCAACGAAAGGTCATGAACAAGTGTGATGAAGACTTTCCATCGAGTCAGGGTCAGGACTCGCTTGCGATTGGAAAGAGTGGGGAGGAAATGGAGTGGTTGGCAAGCAACCGACCCGAAGCATCAATTGGATTCAATCAAGACTTAAAGAACCAAAATATTCAGCAGGCAGAGTGTGAAAAAAGTTTGATATCTGAGGGAGGCAAAAGTTCTCTGTTGCCAATGAGAACTCAGGATCATCTGCAGCAATTCAAAAACTTTTTAAGTCAACCAGCTACACAATCTTCAGTAGTGGGACCCTCATGTGTGACAACTACATCAGTCCATTCAGCTTCAGCTCCCATGCCGAATTCTTTAATCCGTCATTCTCATTCCCATGTAGATAGCGTTTCACATGTGGCAGCAGAGCCTTGCAGGAACCTTAATCCTCATCCAATAACTCAAGGGGTTATTAAAGCATCAAATAATTCCCTAAAAGAAACCAGTAGAACATCAGTTGATCAGGCAGCAAGTGCAGTCCCAGCTAGTAATTCACTTGTTAATGCAGAACTGACATTTAAAGAGAGCGACCCATCTAAGGAGCAACAAGGATGCCAGTTAAAGGAAACTAGCATTTCAAAGAACACTTCTTGTCATGATGACATGTTAACTAAAGGGAAAGAGTCTGCAGTTGTTACCAACATACAGCCTCAGGCTCCGACTTCATCTTCTGATGTGAAGTTGGAGTCTTCTAAGTTAGAAAAACCAGAAAAAGCTGCCAGTAATAAAGGATCATCAGGCACTCGGAAAAGGACCTATGACCCTGATTTGTTTTTTAAAGTCAATGACAAGCTTTATCAAAGGCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAAGTACACAAAGTGATTTCATCAGACTGTACAATCTATGCACTTAAAAGGATAAAGCTAAAAGGCCGGGATTATTCGACTGCATATGGATTTTGTCAAGAGATTGAGTATCTAAACAGACTGAAAGAAAAGAGTAATATTACACAACTTATAGATTATGAGGTGACTGACAAGGCTTTGCTTGAGGGAGTCATGAATGGCTCCTTCAGTAATAAGGATGGTAGAGTCAAGGATGATGGATATATATACATGGTACTTGAATATGGGGAAATTGACTTGGCTCATATGTTGTCTCAGAAGTGGAAGGAACTGAATGGATGCAACCAGACCATAGATGAAAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATTCATGAGGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTCCTCCTCGTCAATGGTTCCCTGAAACTTATTGATTTTGGTATAGCCAAAGCAATAATGAGCGATACAACAAACATCCAACGGGATTCACAGGTTGGTACTCTAAATTACATGTCACCAGAGGCATTTATGTGTAATGAGAGTGATGCAAATGGAAACATCATAAAGTGTGGTAGGCCATCAGATATCTGGTCCCTAGGATGCATCCTTTATCAAATGGTATATGGGAGAACACCTTTTTCAGATTACAAGACATTTTGGGCCAAAGTCAAAGTTATAACTGATCCAAATCATGAAATTATATATGAACCAGTTTCAAATCCATGGCTTCTTGACCTTATGAAAAGGTGTCTAGCATGGGATCGCAATGAAAGGTGGAGAATTCCTCAGCTACTCCAGCATCCTTTTCTTGCCCCTCCAGTTCCTTCTCATCCATCTTTGTCCCAAGACCATTCCTTTAAAATGCTACAACTTATTGCTGAAACTTGTACACATGACACACAGGCATTGCAGCTATGTTGTCAGCTCCAACAGGTGCTTGCTTATCCCTTCAATTTAGTAACTCCTCACTCATTAAATTCAAGAGACCAACAACATAAGTTGCTGTCCCGAATATCAAAACTCTGTATTCAGCTGCAGGAGAGATTGACAAATACCAATAAAGAATAA 2112 0.4157 MDEKPNVSLSPTSSSFLRQVQAALGRHHRAVGPTQSDSIRPKRSTVGQRKVMNKCDEDFPSSQGQDSLAIGKSGEEMEWLASNRPEASIGFNQDLKNQNIQQAECEKSLISEGGKSSLLPMRTQDHLQQFKNFLSQPATQSSVVGPSCVTTTSVHSASAPMPNSLIRHSHSHVDSVSHVAAEPCRNLNPHPITQGVIKASNNSLKETSRTSVDQAASAVPASNSLVNAELTFKESDPSKEQQGCQLKETSISKNTSCHDDMLTKGKESAVVTNIQPQAPTSSSDVKLESSKLEKPEKAASNKGSSGTRKRTYDPDLFFKVNDKLYQRLGKIGSGGSSEVHKVISSDCTIYALKRIKLKGRDYSTAYGFCQEIEYLNRLKEKSNITQLIDYEVTDKALLEGVMNGSFSNKDGRVKDDGYIYMVLEYGEIDLAHMLSQKWKELNGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVNGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLNYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKVKVITDPNHEIIYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLAPPVPSHPSLSQDHSFKMLQLIAETCTHDTQALQLCCQLQQVLAYPFNLVTPHSLNSRDQQHKLLSRISKLCIQLQERLTNTNKE* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01564 703 CDD PKc_Mps1 323 618 IPR027084 -
Rops9g01564 703 SMART serkin_6 325 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01564 703 Gene3D Transferase(Phosphotransferase) domain 1 439 621 - -
Rops9g01564 703 MobiDBLite consensus disorder prediction 24 48 - -
Rops9g01564 703 PANTHER MIXED LINEAGE PROTEIN KINASE 56 652 - -
Rops9g01564 703 Coils Coil 694 703 - -
Rops9g01564 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Rops9g01564 703 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Rops9g01564 703 SUPERFAMILY Protein kinase-like (PK-like) 321 627 IPR011009 -
Rops9g01564 703 FunFam serine/threonine-protein kinase mph1 isoform X1 439 621 - -
Rops9g01564 703 MobiDBLite consensus disorder prediction 271 308 - -
Rops9g01564 703 Gene3D Phosphorylase Kinase; domain 1 318 404 - -
Rops9g01564 703 Pfam Protein kinase domain 325 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01564 703 MobiDBLite consensus disorder prediction 271 286 - -
Rops9g01564 703 FunFam Dual specificity protein kinase TTK 318 427 - -
Rops9g01564 703 ProSiteProfiles Protein kinase domain profile. 325 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01564 Rops-Chr9 27059662 27065157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01564 331 618 MAP Kinase Kinase Kinase AT4G08470 30.612 5.89e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Rops9g01564 Pkinase 1.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01564 K08866 - gmx:100816674 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01564 9 27059662 27065157 Rops9g01564 9 27059662 27065157 ECH