Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01559 ATGGCGGCTTCAGTTGATAACCGTCAATTCGGTGGCTTAAACGGCGTCGTTCTCCCTTTCAACCCAACAGACTCCCCCATTCGCGGTTGCAGCCACGACCTGAAACCGGGTTTCCCGGTGGATTTGTATTCCTCCAGCAGCGATGACGAAGAAAACGACGACTTTTCAAACCTGAAAGACCTCACAAGAAAAGCAAACGCGGAAGTGGAACCGTCCATTTTCGACCCACGCGACGAAGGAACCGCAGATAACTGGATCCCACGTAACGCTTCCATGATCCGTCTCACAGGGAAACACCCCTTCAACTCCGAACCACCACTCCCACGACTCATGCACCACGGTTTCATAACCCCGGTCCCACTCCACTACGTCCGAAACCACGGTTCGGTTCCAAAAGCACGTTTTGAGGAATGGACCGTTGAAGTAATCGGTCTAGTCAAACAACCAACCCGGTTCACCATGGACCGGCTCGTTCGCGAGTTCCCGAGCCTCGAGTTTCCCGTCACCCTTGTCTGCGCTGGTAACCGCCGCAAGGAACAAAACATGGTGAAACAAAGCGTGGGGTTCAACTGGGGAGCAGCGGCGGTTTCCACCTCCGTTTGGCGCGGGGTTCCGTTACGCCACGTGTTACGGCGGTGTGGGATCCAAGCGCGCTCGAAGGGTGCGCTTCACGTGTGTTTCGAGGGTGCTGAGGATCTACCAGGTGGTGGTGGTTCCAAGTATGGAACAAGCATCAAGAGGGAAATTGCTATGGATCCTTCACGTGATGTTATCCTCGCCTACATGCAGAACGGTGAGCCTCTCGCACCGGATCATGGGTTTCCGGTTCGGGTTATCATACCCGGTTTCATTGGTGGTCGTATGGTGAAATGGCTCAAGCGTATTGTGGTGACTGCTGAGGAGTGTAATGGTCATTACCATTACAAGGACAACAGAGTGCTTCCTTCCCATGTTGATGCAGAACTTGCCAGCGAAGAAGCTTGGTGGTACAAGCCGGAGTATATTATCAACGAACTGAACATAAACTCGGTGATTACGACGCCGCGTCACGACGAGATCTTACCCATCAACTCATGGACGACGCAGAGGCCTTACGTACTGAAAGGCTACGCATATTCCGGGGGTGGAAGGAAAGTGACACGAGTAGAAGTAACACTGGACGGTGGAGAAACATGGCACGTGTGCACGTTGGATCACCCAGAGAAACCGAATAAATACGGGAAGTACTGGTGCTGGTGCTTCTGGTCTTTGGAGGTAGAGGTGTTGGACCTTCTTGGGAGCAGGGAGATTGCTGTACGCGCATGGGATGAGGCCCTCAACACCCAGCCTGAAAACCTCATCTGGAATGTCATGGGCATGATGAACAACTGTTGGTTTAGGGTGAAAAAAAATGTGTGCAAACCCCACAAGGGTGAGATTGGAATTGTATTTGAACACCCAACTCAACCAGGAAACCAATCAGGTGGGTGGATGGCAAAGGAAAGACACCTAGAGATATCACAAGAGCCCAAACCAACCCTCAAGAAGAGTGTCTCCACACCATTCATGAACACTGCCTCAAAAATGTTCTCCATCTCTGAAGTCAAGAAACACAGCAACCCCGATTCCGCTTGGATCATCGTCCATGGCCATGTCTACGATTGCACCCGTTTCCTTAATGACCACCCCGGAGGCGCCGACAGCATCCTTATCAACGCCGGCACCGATTGCACCGAGGAATTCGAGGCCATCCATTCCGATAAGGCAAAGAAAATGCTGGAAGATTACAGAATCGGTGAACTCATCACCACAGGCTACAACTCAGACTCATCATCCCCCAACAACTCCGTCCATGGAAACTCCGAAACTACCCATTTGGCTACCATTAAGGAAATCACAACACCACTAAGTAACGTGGCTCTTAACCCACGAGAGAAAATCGCATGCAAGCTAGTTTCGAAAACCTCAATCTCCCATGATGTTAGACTCTTCCGTTTTGCATTACCCTCAGAGGAACAACTCTTAGGATTACCTGTAGGGAAACACATTTACTTATGTGCCACTATTGATGGGAAGCTATGCATGCGAGCCTACACACCAACTAGTAGTGTTGATGAAATTGGGTATTTTGATTTAGTTGTGAAGGTTTACTTCAAAGGGGTACACCCCAAGTTCCCAAATGGTGGGGTCATGTCTCAATACTTGGACTCACTTCCTATTGGCTCCATTTTAGACGTGAAAGGCCCACTTGGTCACATTGAGTACACTGGCAAAGGAAACTTTACAGTTCACGGGAAACACAAGTTTGCTAAGAAGCTTGCAATGGTAGCTGGTGGAACTGGAATCACACCCATTTACCAAGTGGCACAAGCGATTCTTAAGGACCCAGAGGACCGAACAGAAATGCATGTGGTGTATGCTAACCGAACAGAAGATGATATATTGTTGAGGGAAGAGCTTGATGCATGGGCGAAAGAGTATAAAGATAGGTTCAAGGTGTGGTACGTGGTGGAAAACATGAAGGAAGGGTGGGAATACAGTGTGGGCTTCATCACGGAGAGTATCATGAGGGAGCATGTTCCTGAGGCGGCTGAGGAGGATACATTGGCTTTGGCTTGTGGGCCACCACCAATGATTCAGTTTGCCGTGCAACCCAACTTGGAGATGATGGGGTATGACGTCAAGAACGATTTGTTAGTGTTCTAG 2685 0.4991 MAASVDNRQFGGLNGVVLPFNPTDSPIRGCSHDLKPGFPVDLYSSSSDDEENDDFSNLKDLTRKANAEVEPSIFDPRDEGTADNWIPRNASMIRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGSVPKARFEEWTVEVIGLVKQPTRFTMDRLVREFPSLEFPVTLVCAGNRRKEQNMVKQSVGFNWGAAAVSTSVWRGVPLRHVLRRCGIQARSKGALHVCFEGAEDLPGGGGSKYGTSIKREIAMDPSRDVILAYMQNGEPLAPDHGFPVRVIIPGFIGGRMVKWLKRIVVTAEECNGHYHYKDNRVLPSHVDAELASEEAWWYKPEYIINELNINSVITTPRHDEILPINSWTTQRPYVLKGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGSREIAVRAWDEALNTQPENLIWNVMGMMNNCWFRVKKNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKERHLEISQEPKPTLKKSVSTPFMNTASKMFSISEVKKHSNPDSAWIIVHGHVYDCTRFLNDHPGGADSILINAGTDCTEEFEAIHSDKAKKMLEDYRIGELITTGYNSDSSSPNNSVHGNSETTHLATIKEITTPLSNVALNPREKIACKLVSKTSISHDVRLFRFALPSEEQLLGLPVGKHIYLCATIDGKLCMRAYTPTSSVDEIGYFDLVVKVYFKGVHPKFPNGGVMSQYLDSLPIGSILDVKGPLGHIEYTGKGNFTVHGKHKFAKKLAMVAGGTGITPIYQVAQAILKDPEDRTEMHVVYANRTEDDILLREELDAWAKEYKDRFKVWYVVENMKEGWEYSVGFITESIMREHVPEAAEEDTLALACGPPPMIQFAVQPNLEMMGYDVKNDLLVF* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01559 894 Pfam Oxidoreductase molybdopterin binding domain 127 306 IPR000572 -
Rops9g01559 894 PRINTS Cytochrome B5 reductase signature 689 696 - -
Rops9g01559 894 PRINTS Cytochrome B5 reductase signature 767 786 - -
Rops9g01559 894 PRINTS Cytochrome B5 reductase signature 862 870 - -
Rops9g01559 894 PRINTS Cytochrome B5 reductase signature 805 816 - -
Rops9g01559 894 PRINTS Cytochrome B5 reductase signature 668 679 - -
Rops9g01559 894 PRINTS Cytochrome B5 reductase signature 734 748 - -
Rops9g01559 894 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 519 599 IPR036400 -
Rops9g01559 894 Gene3D - 744 894 IPR039261 -
Rops9g01559 894 PIRSF Nitr_rd_NADH 25 893 IPR012137 GO:0006809|GO:0042128|GO:0050464
Rops9g01559 894 PRINTS Cytochrome B5 signature 582 594 IPR001199 -
Rops9g01559 894 PRINTS Cytochrome B5 signature 555 569 IPR001199 -
Rops9g01559 894 PRINTS Cytochrome B5 signature 570 577 IPR001199 -
Rops9g01559 894 PRINTS Cytochrome B5 signature 545 555 IPR001199 -
Rops9g01559 894 Gene3D - 338 512 - -
Rops9g01559 894 Pfam Oxidoreductase FAD-binding domain 642 748 IPR008333 -
Rops9g01559 894 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 520 595 IPR001199 -
Rops9g01559 894 FunFam Nitrate reductase [NADH] 744 894 - -
Rops9g01559 894 Pfam Mo-co oxidoreductase dimerisation domain 334 462 IPR005066 GO:0016491|GO:0030151
Rops9g01559 894 CDD eukary_NR_Moco 78 462 - -
Rops9g01559 894 SUPERFAMILY Riboflavin synthase domain-like 632 750 IPR017938 -
Rops9g01559 894 SUPERFAMILY E set domains 338 465 IPR014756 -
Rops9g01559 894 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 144 179 IPR022407 GO:0043546
Rops9g01559 894 Gene3D - 77 328 IPR036374 -
Rops9g01559 894 Gene3D - 516 597 IPR036400 -
Rops9g01559 894 FunFam NADH-cytochrome b5 reductase 628 743 - -
Rops9g01559 894 Pfam Oxidoreductase NAD-binding domain 768 876 IPR001433 GO:0016491
Rops9g01559 894 CDD cyt_b5_reduct_like 642 889 - -
Rops9g01559 894 SMART Cyt_b5_2 523 595 IPR001199 -
Rops9g01559 894 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 736 888 IPR039261 -
Rops9g01559 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 689 696 IPR001709 GO:0016491
Rops9g01559 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 721 730 IPR001709 GO:0016491
Rops9g01559 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 862 870 IPR001709 GO:0016491
Rops9g01559 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 767 786 IPR001709 GO:0016491
Rops9g01559 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 805 816 IPR001709 GO:0016491
Rops9g01559 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 837 853 IPR001709 GO:0016491
Rops9g01559 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 554 564 IPR001709 GO:0016491
Rops9g01559 894 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 793 802 IPR001709 GO:0016491
Rops9g01559 894 PANTHER SULFITE REDUCTASE 62 468 - -
Rops9g01559 894 FunFam Nitrate reductase 79 328 - -
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 408 418 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 252 268 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 179 191 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 194 209 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 269 282 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 367 381 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 285 298 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 381 393 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 433 445 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 115 131 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 336 348 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 446 459 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 168 179 IPR008335 GO:0016491
Rops9g01559 894 PRINTS Eukaryotic molybdopterin domain signature 93 107 IPR008335 GO:0016491
Rops9g01559 894 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 637 749 IPR017927 GO:0016491
Rops9g01559 894 Pfam Cytochrome b5-like Heme/Steroid binding domain 526 594 IPR001199 -
Rops9g01559 894 FunFam Nitrate reductase 516 597 - -
Rops9g01559 894 FunFam Nitrate reductase 338 514 - -
Rops9g01559 894 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 75 336 IPR036374 -
Rops9g01559 894 Gene3D Translation factors 629 743 - -
Rops9g01559 894 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 551 558 IPR018506 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01559 Rops-Chr9 26835947 26841013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01559 632 885 NADPH P450 reductases AT5G17770 41.016 2.20e-53 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01559 K10534 - gmx:100813471 1566.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01559 9 26835947 26841013 Rops9g01559 9 26835947 26841013 ECH