LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops9g01559	ATGGCGGCTTCAGTTGATAACCGTCAATTCGGTGGCTTAAACGGCGTCGTTCTCCCTTTCAACCCAACAGACTCCCCCATTCGCGGTTGCAGCCACGACCTGAAACCGGGTTTCCCGGTGGATTTGTATTCCTCCAGCAGCGATGACGAAGAAAACGACGACTTTTCAAACCTGAAAGACCTCACAAGAAAAGCAAACGCGGAAGTGGAACCGTCCATTTTCGACCCACGCGACGAAGGAACCGCAGATAACTGGATCCCACGTAACGCTTCCATGATCCGTCTCACAGGGAAACACCCCTTCAACTCCGAACCACCACTCCCACGACTCATGCACCACGGTTTCATAACCCCGGTCCCACTCCACTACGTCCGAAACCACGGTTCGGTTCCAAAAGCACGTTTTGAGGAATGGACCGTTGAAGTAATCGGTCTAGTCAAACAACCAACCCGGTTCACCATGGACCGGCTCGTTCGCGAGTTCCCGAGCCTCGAGTTTCCCGTCACCCTTGTCTGCGCTGGTAACCGCCGCAAGGAACAAAACATGGTGAAACAAAGCGTGGGGTTCAACTGGGGAGCAGCGGCGGTTTCCACCTCCGTTTGGCGCGGGGTTCCGTTACGCCACGTGTTACGGCGGTGTGGGATCCAAGCGCGCTCGAAGGGTGCGCTTCACGTGTGTTTCGAGGGTGCTGAGGATCTACCAGGTGGTGGTGGTTCCAAGTATGGAACAAGCATCAAGAGGGAAATTGCTATGGATCCTTCACGTGATGTTATCCTCGCCTACATGCAGAACGGTGAGCCTCTCGCACCGGATCATGGGTTTCCGGTTCGGGTTATCATACCCGGTTTCATTGGTGGTCGTATGGTGAAATGGCTCAAGCGTATTGTGGTGACTGCTGAGGAGTGTAATGGTCATTACCATTACAAGGACAACAGAGTGCTTCCTTCCCATGTTGATGCAGAACTTGCCAGCGAAGAAGCTTGGTGGTACAAGCCGGAGTATATTATCAACGAACTGAACATAAACTCGGTGATTACGACGCCGCGTCACGACGAGATCTTACCCATCAACTCATGGACGACGCAGAGGCCTTACGTACTGAAAGGCTACGCATATTCCGGGGGTGGAAGGAAAGTGACACGAGTAGAAGTAACACTGGACGGTGGAGAAACATGGCACGTGTGCACGTTGGATCACCCAGAGAAACCGAATAAATACGGGAAGTACTGGTGCTGGTGCTTCTGGTCTTTGGAGGTAGAGGTGTTGGACCTTCTTGGGAGCAGGGAGATTGCTGTACGCGCATGGGATGAGGCCCTCAACACCCAGCCTGAAAACCTCATCTGGAATGTCATGGGCATGATGAACAACTGTTGGTTTAGGGTGAAAAAAAATGTGTGCAAACCCCACAAGGGTGAGATTGGAATTGTATTTGAACACCCAACTCAACCAGGAAACCAATCAGGTGGGTGGATGGCAAAGGAAAGACACCTAGAGATATCACAAGAGCCCAAACCAACCCTCAAGAAGAGTGTCTCCACACCATTCATGAACACTGCCTCAAAAATGTTCTCCATCTCTGAAGTCAAGAAACACAGCAACCCCGATTCCGCTTGGATCATCGTCCATGGCCATGTCTACGATTGCACCCGTTTCCTTAATGACCACCCCGGAGGCGCCGACAGCATCCTTATCAACGCCGGCACCGATTGCACCGAGGAATTCGAGGCCATCCATTCCGATAAGGCAAAGAAAATGCTGGAAGATTACAGAATCGGTGAACTCATCACCACAGGCTACAACTCAGACTCATCATCCCCCAACAACTCCGTCCATGGAAACTCCGAAACTACCCATTTGGCTACCATTAAGGAAATCACAACACCACTAAGTAACGTGGCTCTTAACCCACGAGAGAAAATCGCATGCAAGCTAGTTTCGAAAACCTCAATCTCCCATGATGTTAGACTCTTCCGTTTTGCATTACCCTCAGAGGAACAACTCTTAGGATTACCTGTAGGGAAACACATTTACTTATGTGCCACTATTGATGGGAAGCTATGCATGCGAGCCTACACACCAACTAGTAGTGTTGATGAAATTGGGTATTTTGATTTAGTTGTGAAGGTTTACTTCAAAGGGGTACACCCCAAGTTCCCAAATGGTGGGGTCATGTCTCAATACTTGGACTCACTTCCTATTGGCTCCATTTTAGACGTGAAAGGCCCACTTGGTCACATTGAGTACACTGGCAAAGGAAACTTTACAGTTCACGGGAAACACAAGTTTGCTAAGAAGCTTGCAATGGTAGCTGGTGGAACTGGAATCACACCCATTTACCAAGTGGCACAAGCGATTCTTAAGGACCCAGAGGACCGAACAGAAATGCATGTGGTGTATGCTAACCGAACAGAAGATGATATATTGTTGAGGGAAGAGCTTGATGCATGGGCGAAAGAGTATAAAGATAGGTTCAAGGTGTGGTACGTGGTGGAAAACATGAAGGAAGGGTGGGAATACAGTGTGGGCTTCATCACGGAGAGTATCATGAGGGAGCATGTTCCTGAGGCGGCTGAGGAGGATACATTGGCTTTGGCTTGTGGGCCACCACCAATGATTCAGTTTGCCGTGCAACCCAACTTGGAGATGATGGGGTATGACGTCAAGAACGATTTGTTAGTGTTCTAG	2685	0.4991	MAASVDNRQFGGLNGVVLPFNPTDSPIRGCSHDLKPGFPVDLYSSSSDDEENDDFSNLKDLTRKANAEVEPSIFDPRDEGTADNWIPRNASMIRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGSVPKARFEEWTVEVIGLVKQPTRFTMDRLVREFPSLEFPVTLVCAGNRRKEQNMVKQSVGFNWGAAAVSTSVWRGVPLRHVLRRCGIQARSKGALHVCFEGAEDLPGGGGSKYGTSIKREIAMDPSRDVILAYMQNGEPLAPDHGFPVRVIIPGFIGGRMVKWLKRIVVTAEECNGHYHYKDNRVLPSHVDAELASEEAWWYKPEYIINELNINSVITTPRHDEILPINSWTTQRPYVLKGYAYSGGGRKVTRVEVTLDGGETWHVCTLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGSREIAVRAWDEALNTQPENLIWNVMGMMNNCWFRVKKNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKERHLEISQEPKPTLKKSVSTPFMNTASKMFSISEVKKHSNPDSAWIIVHGHVYDCTRFLNDHPGGADSILINAGTDCTEEFEAIHSDKAKKMLEDYRIGELITTGYNSDSSSPNNSVHGNSETTHLATIKEITTPLSNVALNPREKIACKLVSKTSISHDVRLFRFALPSEEQLLGLPVGKHIYLCATIDGKLCMRAYTPTSSVDEIGYFDLVVKVYFKGVHPKFPNGGVMSQYLDSLPIGSILDVKGPLGHIEYTGKGNFTVHGKHKFAKKLAMVAGGTGITPIYQVAQAILKDPEDRTEMHVVYANRTEDDILLREELDAWAKEYKDRFKVWYVVENMKEGWEYSVGFITESIMREHVPEAAEEDTLALACGPPPMIQFAVQPNLEMMGYDVKNDLLVF*	895

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops9g01559	894	Pfam	Oxidoreductase molybdopterin binding domain	127	306	IPR000572	-
	Rops9g01559	894	PRINTS	Cytochrome B5 reductase signature	689	696	-	-
	Rops9g01559	894	PRINTS	Cytochrome B5 reductase signature	767	786	-	-
	Rops9g01559	894	PRINTS	Cytochrome B5 reductase signature	862	870	-	-
	Rops9g01559	894	PRINTS	Cytochrome B5 reductase signature	805	816	-	-
	Rops9g01559	894	PRINTS	Cytochrome B5 reductase signature	668	679	-	-
	Rops9g01559	894	PRINTS	Cytochrome B5 reductase signature	734	748	-	-
	Rops9g01559	894	SUPERFAMILY	Cytochrome b5-like heme/steroid binding domain	519	599	IPR036400	-
	Rops9g01559	894	Gene3D	-	744	894	IPR039261	-
	Rops9g01559	894	PIRSF	Nitr_rd_NADH	25	893	IPR012137	GO:0006809\|GO:0042128\|GO:0050464

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops9g01559	Rops-Chr9	26835947	26841013	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops9g01559	632	885	NADPH P450 reductases	AT5G17770	41.016	2.20e-53	186

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops9g01559	K10534		-	gmx:100813471	1566.59

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops9g01559	9	26835947	26841013	Rops9g01559	9	26835947	26841013	ECH

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