Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01557 ATGAATAAGAAGACCCGAAGGAAACAACCGAAGCTGGAACGTCGCAATGCGGCGAAGCACTTTGACTACGAAGCTGGACCATCGTCACTCGAATCCTCAGGTTCGGATTCACTTCTCTTCACCCGATCCATGGATTTCTACGACCGAACCAGTTTCCGAGTCGAGGGTGTAGAAGGCGAGTTCGAAATCATTTGCCGCAGCCTCGGGCTCTCCGGACCTGAGGATTTCTCCATACCGGCTGCGGCTTGGGAGGCCATGAAGGTTCGGTCTTCTTCGGACATTCTTCCGAGGCTGAACCTCACCGATTTTGATGAAGCTAAGGAGAACGATGAAATTGGAACGGTAACTGAATCCGAAGATAGGGTTCCGATTAGGAATTTTGATGAGTGTGTTCCCGCAGAGACCAGCGGTTACAGCAACGGTATCAAGGGAATTCGGCCTCCGATGCTTAAACCGCCGCCGGGGATTAGGGTTTCCATCGTGGACGATAACACGTGCTCCACGTGGGATCTTCTTAGGGATTTCGCTCCGAAAGGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAAGTTGGTGGAGTGAGATCGAAGAGAGAGGAAGAGGAGAATGTGGAGATTGTTGGTGAATTTTCGAGGTCGTGTTCGTTTACTACGTCGAATGAAGATGATTCTTCTAGCACCACAACGGATCCCAGGTCGAATAGTATATCTCCTAATGGGAGAGTTAAGCTTGTTCTTACCCCTGGTAGCTGGCAAAAAGGTGAGCTTTTGGGGCGTGGTTCGTTTGGCTCTGTCTATGAAGGGATTTCTGAAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTCTATCAACTGGAGCAGGAGATTGCACTTTTGAGTCAGTTTGAACATGAGAATATAGTTCAATACATTGGCACTGAAATGGATGAAAAAACGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCCCTTGCAAGCCTCTACAGGAGGTATAATCTTCGAGATTCCCAAGTATCTTCCTATACAAGACAGATTCTGCATGGTTTAAAGTATCTCCATGATCGAGACATTGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAATCAAATTGAATGATGTTAAATCATGCAAGGGAACAGCATTCTGGATGGCTCCAGAGGTTGTAAAAGGAAAAAGTACAGGTTATGGGCTTCCCGCCGATATATGGAGTCTGGGGTGCACTGTGTTGGAGATGTTAACGGGCAAATTTCCATACTTTCCTTTGGAATTCATGCAGGCAGTGTATAGAATCGGAAAAGGTGAAACGCCTCCTGTGCCTGATTCTCTTTCAAGAGATGCGCGTGATTTTATCTTGCAGTGTCTTAAAGTTAATCCAGATGAACGTCCCACTGCTGCTCAACTCATAAACCATACATTTGTCCAAAGGTCATTTTCCCAGTCCTCTGGCTCTGCATCTCCCTATATTCCCAGAAGAGGTTAA 1572 0.4567 MNKKTRRKQPKLERRNAAKHFDYEAGPSSLESSGSDSLLFTRSMDFYDRTSFRVEGVEGEFEIICRSLGLSGPEDFSIPAAAWEAMKVRSSSDILPRLNLTDFDEAKENDEIGTVTESEDRVPIRNFDECVPAETSGYSNGIKGIRPPMLKPPPGIRVSIVDDNTCSTWDLLRDFAPKGEEEEEEEEEEKVGGVRSKREEEENVEIVGEFSRSCSFTTSNEDDSSSTTTDPRSNSISPNGRVKLVLTPGSWQKGELLGRGSFGSVYEGISEDGFFFAVKEVSLLDQGSQGKQSVYQLEQEIALLSQFEHENIVQYIGTEMDEKTLYIFLELVTKGSLASLYRRYNLRDSQVSSYTRQILHGLKYLHDRDIVHRDIKCANILVDANGSVKLADFGLAKAIKLNDVKSCKGTAFWMAPEVVKGKSTGYGLPADIWSLGCTVLEMLTGKFPYFPLEFMQAVYRIGKGETPPVPDSLSRDARDFILQCLKVNPDERPTAAQLINHTFVQRSFSQSSGSASPYIPRRG* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01557 523 MobiDBLite consensus disorder prediction 210 241 - -
Rops9g01557 523 Pfam Protein kinase domain 252 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01557 523 PRINTS Tyrosine kinase catalytic domain signature 329 342 IPR001245 GO:0004672|GO:0006468
Rops9g01557 523 PRINTS Tyrosine kinase catalytic domain signature 430 452 IPR001245 GO:0004672|GO:0006468
Rops9g01557 523 PRINTS Tyrosine kinase catalytic domain signature 364 382 IPR001245 GO:0004672|GO:0006468
Rops9g01557 523 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Rops9g01557 523 MobiDBLite consensus disorder prediction 176 241 - -
Rops9g01557 523 MobiDBLite consensus disorder prediction 190 207 - -
Rops9g01557 523 SUPERFAMILY Protein kinase-like (PK-like) 233 509 IPR011009 -
Rops9g01557 523 FunFam Mitogen-activated protein kinase 1, putative, expressed 249 516 - -
Rops9g01557 523 SMART serkin_6 251 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01557 523 Coils Coil 521 523 - -
Rops9g01557 523 MobiDBLite consensus disorder prediction 1 34 - -
Rops9g01557 523 ProSiteProfiles Protein kinase domain profile. 251 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01557 523 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 148 517 - -
Rops9g01557 523 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Rops9g01557 523 Gene3D Transferase(Phosphotransferase) domain 1 249 517 - -
Rops9g01557 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01557 Rops-Chr9 26767985 26776054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01557 11 508 MAP Kinase Kinase Kinase AT4G08500 51.045 4.66e-169 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops9g01557 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01557 K13414 - gmx:100819177 738.028