Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01532 ATGAGAGAGCAAAGGGTCCTTCATCTTGAGGATACTGGCCAAATAGAGAGGTCTCAGTGGGTACTGGATTCTCCAAATCCACCACCTCTGTGGAAGAAGCTACTGAGTTCAGTCAAGCAAACCATTTTGCCTCATGGCAGCAAGTTCTGCTTTTCATCCAAGAAGAAAACTTTCAAAGGACATGCAGCCTCATTCTTGCAGAGTTTATTCCCAATTCTTGTTTGGTTAAGAGATTACAAAGCCTCCAAGTTTAAAGATGATCTGTTAGCTGGTTTAACTCTTGCCAGCTTGAGCTTACCTCAGAGCATAGGATATGCTAATTTAGCAAAAGTTGACCCTGAATATGGCCTGTATACCAGTATTGTTCCTCCTCTTATTTATGCTGTGATGGGGAGCTCAAGAGAAATTGCAATTGGACCTGTAGCTGTTGTGTCAATGCTGTTATCTTCCCTAGTCCAGAAAGTGGAAGATCCTGTTACTAATCCTCATGCCTATAGAAATTTTGTCTTTACTGTGACCTTCTTTACTGGAATTTTTCAAGCTGCATTTGGTATTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCCTAGTTGGATTCATGGCAGGTGCAGCCATCATTATTGGTCTTCAGCAGCTCAAGGGCTTGCTGGGGATTACTCACTTTACCACCAAAACTGATGCAGTATCAGTGTTGGTATCTGTTTATAAGTCACTGCATCAACAAATTACTACTGGAGAAAAATGGTGCCCTCTGAATTTTGTCCTGGGGTGTTCATTCTTGATTTTCCTTCTAGTTACCCGTTTTGTTGGAAGAAGAAACAAAAAGCTCTTCTGGTTGCCTACTATTTCTCCTCTTCTATCAGTTATACTTTCAACTTTAATTGTGTATTTGTCTAAAGCTGATAAGCAAGGAGTTAACATATTAAAGCATGTCAAAGGAGGGCTGAATCCAAGTTCACTTCACCAGTTGCAATTCCATGGTCAAAATGTTGGACAAGCAGCCAAAATTGGATTGATTTGCGCAGTTATCGCACTCACTGAAGCTATAGCTGTTGGTAGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGGAACAAAGAAATGTTATCAATGGGATTCATGAACATTGCAGGATCTTTAACTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACAGCAGTGAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCCATTACAGTGCTTTTGTCCCTTGAATTATTTGCAAGGCTCTTATACTATACCCCTGTGGCTATCCTTGCTTCTATCATCCTCTCGGCACTTCCTGGATTAATTGACATAAGTGAGGCTTGTTATATATGGAAGGTTGATAAATTAGATTTTCTTGCCTGTCTTGGTGCTTTCCTTGGAGTCTTGTTTGCATCAGTGGAGATTGGTCTTCTTGTTGCAGTGATAATCTCGTTTGCAAAGATACTAATACAATCAATTCGACCTGGAGTAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCCTTTTGTGATGTTACTCAATATCCCATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGTTCTGGCTCACTTTGCTTTGCAAATGCCAATTTTGTCATAGAAAGAATACTCAAGTGGGTCATGGAAGAAGGAGATGACCTTCAAGGAGCTTCCAAGGGAAATGTCCGAGCAGTGATTCTAGACATGACAAACCTGATGAATGTTGATACTTCCGGAATTCTAGCAATTGAAGAACTGCACAAGAGGCTGCAATCACGTGGAGTAGAATTAGCTATGGTCAACCCGAGGTGGATAGTAATTCACAAGCTCAAGCTTGCACACTTTGTGGAGAAAATCGGAAAAGAATGGGTTTTCCTTACTGTTGGAGAAGCAGTAGATGCTTGTCTGTCTTCTAAAATTGCCAGAGCTTGA 1965 0.4097 MREQRVLHLEDTGQIERSQWVLDSPNPPPLWKKLLSSVKQTILPHGSKFCFSSKKKTFKGHAASFLQSLFPILVWLRDYKASKFKDDLLAGLTLASLSLPQSIGYANLAKVDPEYGLYTSIVPPLIYAVMGSSREIAIGPVAVVSMLLSSLVQKVEDPVTNPHAYRNFVFTVTFFTGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTTKTDAVSVLVSVYKSLHQQITTGEKWCPLNFVLGCSFLIFLLVTRFVGRRNKKLFWLPTISPLLSVILSTLIVYLSKADKQGVNILKHVKGGLNPSSLHQLQFHGQNVGQAAKIGLICAVIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVLLSLELFARLLYYTPVAILASIILSALPGLIDISEACYIWKVDKLDFLACLGAFLGVLFASVEIGLLVAVIISFAKILIQSIRPGVEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFVIERILKWVMEEGDDLQGASKGNVRAVILDMTNLMNVDTSGILAIEELHKRLQSRGVELAMVNPRWIVIHKLKLAHFVEKIGKEWVFLTVGEAVDACLSSKIARA* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01532 654 SUPERFAMILY SpoIIaa-like 529 646 IPR036513 -
Rops9g01532 654 ProSiteProfiles STAS domain profile. 539 646 IPR002645 -
Rops9g01532 654 Gene3D STAS domain 502 649 IPR036513 -
Rops9g01532 654 FunFam Sulfate transporter 31 502 649 - -
Rops9g01532 654 Pfam STAS domain 523 642 IPR002645 -
Rops9g01532 654 CDD STAS_SulP_like_sulfate_transporter 523 639 - -
Rops9g01532 654 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Rops9g01532 654 Pfam Sulfate permease family 84 470 IPR011547 GO:0016020
Rops9g01532 654 NCBIfam sulfate permease 71 642 IPR001902 GO:0016020|GO:0055085
Rops9g01532 654 PANTHER SULFATE TRANSPORTER 53 647 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01532 Rops-Chr9 26172649 26177725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01532 14 651 Inorganic Solute Cotransporters AT5G10180 63.594 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01532 K17469 - gmx:100776591 1106.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01532 9 26172649 26177725 Rops10g01817 10 33792332 33797627 PCT