Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01530 ATGTCCTCAATGGGTCTTCCAGCTGATGAAAATCTTGAGACAAAAGATATGGATGGGAGAAGTTTTTCATCTTCACATGGCCATGAACCATATGTCCACAAGGTTGGAATTCCTCCAAAACAAAACCTCTTCAAGGAATTCCAAGCCACTGTGAAAGAAACATTCTTTGCAGATGATCCTCTAAGGTCCTTCAAGGATCAACCAAAATCCCGGAAGTTCATCCTTGGCATTGAAGCCATTTTTCCCATACTTAATTGGGGGAGAACTTATAGCCTCAAAAAATTTAGGGGGGATCTTATTGCTGGTCTAACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTGGCTCCACAATATGGATTGTACTCCAGCTTGGTTCCACCACTGATTTATTCTGTCATGGGTAGTTCTCGTGACATTGCAATTGGACCAGTGGCAGTGGTTTCTCTCTTGCTGGGGACTTTACTTCAGAATGAGATTGATCCCATTGCAAATCCAGCAGACTATCGACGACTTGCTTTTACTGCCACTTTTTTTGCTGGGATTACTCAAGCAACGCTTGGAGTTTTTAGGTTAGGATTTTTGATTGATTTTCTATCTCATGCTGCAATTGTTGGTTTTATGGGGGGTGCTGCCATCACAATTGCCCTTCAACAGCTTAAGGGTTTCCTTGGGATTCAAAAGTTCACAAAGAAAACTGATATTATCTCTGTGATGCATTCAGTATTCTCATCAGCCCATCATGGATGGAACTGGCAAACTATAGTAATTGGAGCCACCTTTCTGGCTTTTCTTCTGTTTGCCAAGTATATTGGAAAGAAGAGCCAGAAATTCTTCTGGGTGCCAGCAATTGCTCCATTGATATCTGTTGTGCTCTCCACTTTTTTTGTATACATAACCCATGCGGACAAGCATGGTGTAGCAATAGTAAATCACATAGAGAAAGGGATCAATCCTTCATCTGTGAAAGAAATTTATTTTAGTGGTGATTACCTTGGGAAAGGTTTAAGAATTGGCATCGTGGCAGGCATGATAGCATTGACTGAAGCCATAGCAATTGGAAGAACATTTGCTTCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGTTATGTAGCAACTGGTTCTTTCTCTCGGTCAGCAGTAAATTTCATGGCTGGCTGCGAAACTGCAGTCTCTAATATTTTCATGTCCATTGTTGTGCTCTTAACCCTGCAATTCATAACACCTCTTTTCAAATACACTCCAAATGCCATTCTTTCTTCAATCATAATTTCTGCAGTCATCAACCTTGTGGACTATAAGGCAGCAATCTTGATATGGAAGATTGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTTGGGGTTGTTTTTGCCTCAGTTGAGATAGGACTTTTAATTGCTGTCTCTATATCCTTTGCAAAGATCCTATTACAAGTCACAAGACCCCGAACTGCTATTCTAGGGAAGATTCCTAGGACAACTGTCTATAGAAACATCCAACAATACCCTGAAGCCACGAGGGTTCCAGGTGTACTGATTATAAGAGTTGATTCTGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTAAGATGGTTGATGGATGAGGAAGAACAAGTGAAAGGAGACTACCAAACAAGAATCCAATTTTTGATAGTGGAGATGTCACCCGTTACTGACATCGATACCAGTGGCATCCATGCCCTTGAAGAGTTATTTAGAAGTCTTCAGAAGAGAGATGTTCAGCTTGTTCTTGCAAATCCTGGACCTCTAGTAATAGACAAGCTCCACACTTCCAACTTTGCTAACTTGCTTGGTGAGGACAAGATCTTCCTCACTGTTGCAGAAGCTGTTGCTTATTGTTCTCCAAAGCTAGCTGAGGACCCTTGA 1977 0.4067 MSSMGLPADENLETKDMDGRSFSSSHGHEPYVHKVGIPPKQNLFKEFQATVKETFFADDPLRSFKDQPKSRKFILGIEAIFPILNWGRTYSLKKFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSLVPPLIYSVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPIANPADYRRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIQKFTKKTDIISVMHSVFSSAHHGWNWQTIVIGATFLAFLLFAKYIGKKSQKFFWVPAIAPLISVVLSTFFVYITHADKHGVAIVNHIEKGINPSSVKEIYFSGDYLGKGLRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCETAVSNIFMSIVVLLTLQFITPLFKYTPNAILSSIIISAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATRVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEEQVKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELFRSLQKRDVQLVLANPGPLVIDKLHTSNFANLLGEDKIFLTVAEAVAYCSPKLAEDP* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01530 658 PANTHER SULFATE TRANSPORTER 41 651 IPR001902 GO:0016020|GO:0055085
Rops9g01530 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016020
Rops9g01530 658 Pfam STAS domain 528 646 IPR002645 -
Rops9g01530 658 FunFam Sulfate transporter 31 507 653 - -
Rops9g01530 658 MobiDBLite consensus disorder prediction 1 27 - -
Rops9g01530 658 NCBIfam sulfate permease 82 646 IPR001902 GO:0016020|GO:0055085
Rops9g01530 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Rops9g01530 658 Gene3D STAS domain 507 654 IPR036513 -
Rops9g01530 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Rops9g01530 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Rops9g01530 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01530 Rops-Chr9 26132508 26139139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01530 1 657 Inorganic Solute Cotransporters AT1G22150 77.169 0.0 1013
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01530 K17470 - gmx:100797668 1179.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01530 9 26132508 26139139 Rops10g01816 10 33752866 33757930 PCT