Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01511 ATGGGGAAGACGTGGAATGGGAACTATTTGCAAGACAGTCCCATCGTAGTTAAATGGAAGAAACCTTTTGCTGGCTTATCACATGGAAAGGGATTTGTACTAGAAAATATAGGTATTGAGGCTAAGCAACCCAACTCCGCCATTGATAAGTGTGTCAGGGTTCAATTCCTCAAAAATGGGAACAACATTGATGTAGAGAGTGATGAAGTATTGATAGCTAGATTTGGATGA 231 0.4026 MGKTWNGNYLQDSPIVVKWKKPFAGLSHGKGFVLENIGIEAKQPNSAIDKCVRVQFLKNGNNIDVESDEVLIARFG* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01511 76 Gene3D - 8 76 IPR012340 -
Rops9g01511 76 FunFam 40S ribosomal protein S23 8 76 - -
Rops9g01511 76 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 18 63 IPR006032 GO:0003735|GO:0005840|GO:0006412
Rops9g01511 76 Pfam Ribosomal protein S12/S23 17 63 IPR006032 GO:0003735|GO:0005840|GO:0006412
Rops9g01511 76 SUPERFAMILY Nucleic acid-binding proteins 15 72 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01511 Rops-Chr9 25447348 25447578 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01511 3 76 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 53.488 2.25e-23 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01511 K02973 - atri:130813873 85.8853