Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01499 ATGGATAAATTATGCTGTTTTAAGTCTTCTTTCTCTAAGCTTGTAGCCGCACGTTCTTCGTCTAGCACCGGTAAGGGAAAAAATCATGAAGGATCGATAAAGTATGGTTTCACCCTAGTGAAAGGGAGAGCTACTCATCCAATGGAGGATTACCATGTTGCCAAGTTTGTGCAGATAAAGGAAAAAGAATTGGGTTTGTTTGCTGTTTATGATGGTCACCTGGGAGATCGTGTGCCTGCCTACTTACAGAAACATTTGTTTTCCAACATTTTAAAGGAGGAAGACTTTTGGGATGACCCCGCTGCATCTATTTCAAGAGCATATCTGAGCACAGATCAGGCAATTCTTTCACATAGTTCTGATTTGGGGCGTGGTGGATCAACAGCTGTAACTGCGATATTAATCAATGGGCAAAGGTTATGGATAGCTAATGTAGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCAAGCCGTGCAAATGACTATAGAGCATGAGCCCAACACAGAACGAGGAAGCATTGAGAATAAAGGTGGTTTTGTCTCCAATATGCCAGGTGATGTGCCTAGAGTAAATGGTCAACTGGCCGTTTCTCGTGCATTTGGAGATAAGAGCCTCAAGGCACATTTAAGATCAGACCCTGATGTACAGAGTACTGATGTAGATGTTGATATTGATATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGCCTAATCAAGAGGCAGTGGACATTGCTAGAAGGATGAGAGATCCACTGAAAGCAGCTAAGCAATTAACAGCTGAAGCATTAAAAAGAGACATTTATAGCACCAATAAGGGTATATCTCAACAGGGCATGCCATTGCCAATTTATGGACTGCAACAAACATCGTATACTACAATACTTGGTTGGTCTGTTAATTTTCACCCATCAACTCTGGGCCGCGACAACGATCATTCTTTGACGGTAGCAGCAAGCAGTGGAGTGATGCAGCAAAAGCTGGCAGATCTTACGGGTATAGGAATCAACTTGTGGATTACATCGCCAACAGGGATCAGGCGAGTCGCACACACTGCACAGTCTGCGGTGGACGTTCGGTAG 1089 0.4334 MDKLCCFKSSFSKLVAARSSSSTGKGKNHEGSIKYGFTLVKGRATHPMEDYHVAKFVQIKEKELGLFAVYDGHLGDRVPAYLQKHLFSNILKEEDFWDDPAASISRAYLSTDQAILSHSSDLGRGGSTAVTAILINGQRLWIANVGDSRAVLSRKGQAVQMTIEHEPNTERGSIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKAHLRSDPDVQSTDVDVDIDILILASDGLWKVMPNQEAVDIARRMRDPLKAAKQLTAEALKRDIYSTNKGISQQGMPLPIYGLQQTSYTTILGWSVNFHPSTLGRDNDHSLTVAASSGVMQQKLADLTGIGINLWITSPTGIRRVAHTAQSAVDVR* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01499 362 CDD PP2Cc 33 268 IPR001932 -
Rops9g01499 362 Pfam Protein phosphatase 2C 43 268 IPR001932 -
Rops9g01499 362 SMART PP2C_4 30 276 IPR001932 -
Rops9g01499 362 PANTHER PROTEIN PHOSPHATASE 27 269 IPR015655 GO:0004722|GO:0006470
Rops9g01499 362 SUPERFAMILY PP2C-like 32 268 IPR036457 -
Rops9g01499 362 FunFam Probable protein phosphatase 2C 39 25 278 - -
Rops9g01499 362 ProSiteProfiles PPM-type phosphatase domain profile. 34 284 IPR001932 -
Rops9g01499 362 Gene3D - 29 278 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01499 Rops-Chr9 25175429 25192606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01499 1 247 PP2C-type Phosphatase Gene Family AT1G34750 74.494 1.53e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01499 K17506 - gmx:100797292 472.241