Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01484 ATGCCACGCCCACGTATTCATCCTCAGCCGGCTCTTTTGGAAGAGGAACTTGAAGTGCAGCATGCAGAAATGAGGAGGCTGGTGGCAGATTCATGCTTCGTGGAAACGTGGGAGAAGGTGAGCCCCAACATAGACCCACCTGAGGCACCTCTGTCATTCATGCAACCTCGCCCACCTACACCATCTTCGCTCCCTTCAACGCTCACTGTCAGATTCGTCCTCCCTCACGCTTCCCAGCTCTCCACCAAAGAGGTTGACATGGTCATAGTACCAGCAACGACTGGGCAGATGGGTGTTCTCCCTGGGCATGTAGCAACAATTGCTGAGTTGAAACCTGGAGTCCTATCTGTACACGAGGGGAATGAAGTGAGCAAGTTTTTTTATCGACAGTGGCTTTGCTTTCATCTATACAAACTCGTGTGGCATGTTTGGGAGGAGGAAAAATTGCTAAGACCATTCAAGGTTCCTTGCTCGGTTTTCATTCATCCTTCTCAAACCAAACAAGCCTCCCAAGCCGTTCTCCGTGAACTGGACTCTTTGCTTTGCACGTTCAGTGAAGCCTTTGACGGCATCGTATTAGCTTATGATGTCGACTCACTTGACAAGTGTGCGAAGATGCTTCCTGGTGTTCATCCTTATATTAGTGTTAAATTGAAGGTCAAGTTGTTACTTTTATTCTCCCAAGCCATGATACGGTTTTTGGTCAGGAGCTTTGATGAGGAAATACTTCATGGAACTTGGATTACCGGAGCACACAGGCTTCATGCCAACCCTCATTTTTTCACAAGCTCACCAACTACCCCACAGCATGGTCGCGCAATTTACGTAGGTTCTCAAAGCAGGGGGACGAAGCACGCAACTTGCATGAGCTTGGAAGTGGCAAGGCTGTGCATGGGATAA 900 0.4867 MPRPRIHPQPALLEEELEVQHAEMRRLVADSCFVETWEKVSPNIDPPEAPLSFMQPRPPTPSSLPSTLTVRFVLPHASQLSTKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNEVSKFFYRQWLCFHLYKLVWHVWEEEKLLRPFKVPCSVFIHPSQTKQASQAVLRELDSLLCTFSEAFDGIVLAYDVDSLDKCAKMLPGVHPYISVKLKVKLLLLFSQAMIRFLVRSFDEEILHGTWITGAHRLHANPHFFTSSPTTPQHGRAIYVGSQSRGTKHATCMSLEVARLCMG* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01484 299 CDD F1-ATPase_delta 68 128 IPR001469 GO:0015986|GO:0045261|GO:0046933
Rops9g01484 299 Gene3D - 62 130 IPR036771 -
Rops9g01484 299 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 67 125 IPR036771 -
Rops9g01484 299 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 68 127 IPR020546 GO:0015986
Rops9g01484 299 Gene3D - 142 239 IPR036898 -
Rops9g01484 299 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 35 127 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01484 Rops-Chr9 24883372 24884350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01484 30 134 Primary Pumps ATPases AT5G47030 66.667 2.73e-49 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01484 K02134 - tcc:18614544 163.31