Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01475 ATGTCAAAATCAGAATACAATAGAATTGCAGTGATCAAAGGTAATAGCATGGAGCGCTATGAGATTCTCAAAGATATTGGGTCTGGGAATTTTGCTGTTGCCAAGCTTGTTAGAGATATCTGCACCGAAGAGTTTTTTGCTGTCAAGTTTATTGAAAGAGGCCAAAAGATTGATGAGCATGTCCAGAGGGAAATCATGAACCATAGATCATTGAAGCATCCCAATATTGTTAGATTCAAAGAGGTCCTTCTGACACCAACACATCTAGCCATAGTAATGGAGTATGCTGCCGGAGGAGAACTCTTTGAGAGGATATGCAATGCTGGCAGATTCATTGAAGATGAGGCAAGATTTTTCTTTCAGCAATTGATATCAGGAGTCAGTTACTGCCATTCAATGCAAATCTGTCATAGAGATCTGAAGCTTGAAAACACACTCTTAGATGGAAGCACTGCGCCACGAGTAAAAATTTGTGACTTTGGTTACTCAAAGTCATCTGTACTGCATTCACAACCTAAGTCTACAGTAGGAACTCCTGCTTACATTGCACCTGAGGTCCTGACAAGGAAAGAATATGATGGAAAGATTGCGGATGTTTGGTCTTGTGGAGTCACCTTATACGTGATGATAGTCGGGGCTTATCCTTTTGAAGACCCAGAGGACCCGAAGAACTTTAGAAAAACCATTGGTAGGATACTTAGTGTCCAGTACTCAGTCCCTGATTATGTACGAGTTTCCATGGACTGTACACATCTTCTATCACAAATATTTGTGGCGAATCCTGAAAAGAGAATAACAATACCAGAAATTAAAAACCATCCATGGTTTTTGAGGAACTTACCCATAGAATTAATGGAAGGTGGAAGCTGGCAAACCAATGATGTAAATAATCCATCACAAAGTGTTGAGGAAGTCCTATCCATTATACAAGAGGCAAGAAAATCTCTTAATGTCCCCAATGCTAATGGCCTTTTTACTGGAGGCAGCATGGACCTTGATGACTTGGATGCTGATGCAGATCTTGAGGATATAGAAACAAGTGGTGATTTTGTGTGCCCTCCTCTTTAA 1068 0.4045 MSKSEYNRIAVIKGNSMERYEILKDIGSGNFAVAKLVRDICTEEFFAVKFIERGQKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICNAGRFIEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTRKEYDGKIADVWSCGVTLYVMIVGAYPFEDPEDPKNFRKTIGRILSVQYSVPDYVRVSMDCTHLLSQIFVANPEKRITIPEIKNHPWFLRNLPIELMEGGSWQTNDVNNPSQSVEEVLSIIQEARKSLNVPNANGLFTGGSMDLDDLDADADLEDIETSGDFVCPPL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01475 355 ProSiteProfiles Protein kinase domain profile. 20 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01475 355 PANTHER SERINE/THREONINE KINASE 18 295 - -
Rops9g01475 355 FunFam Serine/threonine-protein kinase SAPK2 17 95 - -
Rops9g01475 355 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Rops9g01475 355 FunFam Serine/threonine-protein kinase SRK2E 96 284 - -
Rops9g01475 355 CDD STKc_SnRK2 19 275 - -
Rops9g01475 355 Gene3D Phosphorylase Kinase; domain 1 2 95 - -
Rops9g01475 355 Gene3D Transferase(Phosphotransferase) domain 1 96 283 - -
Rops9g01475 355 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Rops9g01475 355 SMART serkin_6 20 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01475 355 Pfam Protein kinase domain 20 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01475 355 SUPERFAMILY Protein kinase-like (PK-like) 14 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01475 Rops-Chr9 24566418 24570536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01475 19 295 CBL-interacting serine-threonine protein kinases AT4G24400 41.608 1.96e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Rops9g01475 Pkinase 7.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01475 K14498 - gmx:100798091 627.476