Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01459 ATGTTGCAGAAAACAAAATTGAACCGTAAGAAGAAGCAAAACAAGGAAGATAAGAATTCTGATCCAAACAAGCCTAAGAGACCTCCATCTGCATTCCTCTTATTCAGTAAAGAAGTAAGGAAGAGTTTACAGGAGGAAAATCCAGGAATCAGTACCTCCGGCCTTAATGCACTTGTTTCGTTAAAGTGGAAGACAATTTCTTATAAGAAATTGCCTCAAATCTGCCATAATGGTGCTTAG 240 0.3792 MLQKTKLNRKKKQNKEDKNSDPNKPKRPPSAFLLFSKEVRKSLQEENPGISTSGLNALVSLKWKTISYKKLPQICHNGA* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01459 79 MobiDBLite consensus disorder prediction 1 31 - -
Rops9g01459 79 Pfam HMG (high mobility group) box 25 68 IPR009071 -
Rops9g01459 79 SMART hmgende2 24 79 IPR009071 -
Rops9g01459 79 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 25 70 IPR009071 -
Rops9g01459 79 MobiDBLite consensus disorder prediction 10 24 - -
Rops9g01459 79 PANTHER HIGH MOBILITY GROUP B PROTEIN 13 2 69 IPR044601 GO:0003677
Rops9g01459 79 Gene3D High mobility group box domain 5 71 IPR036910 -
Rops9g01459 79 SUPERFAMILY HMG-box 12 68 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01459 Rops-Chr9 24209950 24210465 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Rops9g01459 HMG_box 6.7e-11 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01459 K09273 - gmx:100783033 97.4413