Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01456 ATGCTTGAGAAAGGGTTGTTTGGAAGGGATGCCATCAATGTTATGGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCCGAGACCTATAAGCAGTGGCAGGTTAGGAACCAGAGAGCTGGGTTCAAGCAACTCAGATTGGATCCTGAGTTGGTGAATCAAGCCAAAGTAATGGCGAAGAGGGAATATCATAAAGACTTTGTAGTTGATGAGGGTGGCAAATGGGTTTTGCAGGGATGGAAAGGGTGTATTCTTAATGCTTTTTCTGCTTGGGTTCCTGCTTAA 282 0.4645 MLEKGLFGRDAINVMACEGAERVERPETYKQWQVRNQRAGFKQLRLDPELVNQAKVMAKREYHKDFVVDEGGKWVLQGWKGCILNAFSAWVPA* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01456 93 ProSiteProfiles GRAS family profile. 1 91 IPR005202 -
Rops9g01456 93 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 84 IPR005202 -
Rops9g01456 93 Pfam GRAS domain family 2 90 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01456 Rops-Chr9 24138798 24139079 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01456 1 93 GRAS Transcription Factor Family AT1G07530 58.065 4.55e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops9g01456 GRAS 3.3e-21 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01456 - - cam:101504630 179.874