Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01450 ATGAGGAAGAAAAGGAAAGGAAGTGAAACAGATGAATCTTCGAATTTGCCTGAGATTTTGAAGTCTCACTATTCGCTGGAAGATTGTTCGAGATTGAAGAAGAGATGTAGAGAATCAGATGGTTCTGGTTCCTACAACAGTAGGGTGGCGGGTATTGCCACCGTTCCCCCGTGTGGGACTTGGTCTCTGATCTCTCGAGGAAGGGGCCTGAAGAGAAAAATAGGGTGCATTGATGTGGCTACCCAGATGGGGAGAAAGAAGAAAATTGAAGATGATTACGTTACTGGGGTGAAGATCGGTGAGGGGAAGTTCGGGTGTGTTTGGTTGTGCAGGTCCCGTGTTGGTGGTGATGAATATGCGTGCAAGACGTTGAAGAAGGGTGAGGAGACGGTTCACAGAGAGGTGGAGATAATGCAGCACTTGTCTGGGCATCCTGGGGTTGTGACTTTGCAGGCAGTGTATGAGGAAGCTGATTGCTCTCATCTTGTGATGGAGTTGTGCTCTGGAGGAAGGTTGGTGGATCATATGGCTAGGGAAGGTCCTTGTTCTGAACAACGGGCTGCTAGCATACTCAAGGAGGTGATGTTGGTTGTTAAGTATTGTCATGATATGGGAGTTGTGCATAGAGATATCAAACCTGAGAATATTCTTCTCACCACCTCAGGGAAAATCAAGCTTGCGGATTTTGGCATGGCTATGAGAATTTCTGAGGGTCAGAACTTGACGGGTTTGGCTGGCAGCCCTGCATATGTTGCACCAGAAGTATTGTTGGGTAGATATTCCGAGAAGGTTGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGGCCTTCCATTTAAAGGAGATTCACTAGAAGCAGTTTTTGAGGCTATTAAGAATGTGGAACTAGATTTCCAAATGGGTACATGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCCGATGAAGTACTTAGGCATCCTTGGATATTGTTCTACACAGAGAGCACATTGAAGATGCTGCCAGTTGAATTAAAATTAAAGCACCAAAATGGAGCTGCTTGCGACAAGTTTGTTGCTTCTGAGCCTTGGTTAGGAGGAAAAAGTACAGATGATGTCTCCCTTAATGAGGTTTCAAGCCCGTTTTCATCCTCTGAAAGTTGCAATTCAGAAAATCATGATGATTGTGTGTGGATTGATGCACTTGCCACTGCAATTTCACATGTGAGGATATCCGAACCAAAGAGGAGCAAGTTGTGGGGTCCCACAAGTCCAATTGATCAGCAATGTTCATCTAACATGAAGGCTAACCTCTGCAAAGCATTTTGA 1362 0.4523 MRKKRKGSETDESSNLPEILKSHYSLEDCSRLKKRCRESDGSGSYNSRVAGIATVPPCGTWSLISRGRGLKRKIGCIDVATQMGRKKKIEDDYVTGVKIGEGKFGCVWLCRSRVGGDEYACKTLKKGEETVHREVEIMQHLSGHPGVVTLQAVYEEADCSHLVMELCSGGRLVDHMAREGPCSEQRAASILKEVMLVVKYCHDMGVVHRDIKPENILLTTSGKIKLADFGMAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGGLPFKGDSLEAVFEAIKNVELDFQMGTWESISKPARDLVGRMLTRDISARITADEVLRHPWILFYTESTLKMLPVELKLKHQNGAACDKFVASEPWLGGKSTDDVSLNEVSSPFSSSESCNSENHDDCVWIDALATAISHVRISEPKRSKLWGPTSPIDQQCSSNMKANLCKAF* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01450 453 FunFam Serine/threonine-protein kinase PEPKR2 84 409 - -
Rops9g01450 453 ProSiteProfiles Protein kinase domain profile. 93 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01450 453 PANTHER SERINE/THREONINE-PROTEIN KINASE 80 359 - -
Rops9g01450 453 SMART serkin_6 93 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01450 453 Gene3D Transferase(Phosphotransferase) domain 1 84 376 - -
Rops9g01450 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Rops9g01450 453 SUPERFAMILY Protein kinase-like (PK-like) 84 376 IPR011009 -
Rops9g01450 453 CDD STKc_CAMK 92 340 - -
Rops9g01450 453 Pfam Protein kinase domain 93 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01450 453 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01450 Rops-Chr9 24003390 24006915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01450 93 341 EF-hand Containing Proteins AT1G50700 45.174 1.41e-75 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops9g01450 Pkinase 1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01450 - - gmx:100812729 683.33