Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01445 ATGGGCTATCTCTCATGTAACACAATCGCCACATGCGATCCCCATTACAGGCACCTCAAGGAGAAAACCACCAAACACCCCAAAACCCATAACAACCCTCAACTCATAAGGGAGTTCTCTTACTCAGAACTCCTCGCCGCCACTAACAACTTCTCCTCCGACACCTTCTTAGGCAAAGGCAGCTATGGCACCGTCTACAAAGCCACCCTCGACGCCGGCAACCTCATCGCCGCCGTCAAAATCACCAAACGCCACCACTCCGCCGCCGACAACGAAATCGAAATCCTCTCCCGCGTCCCAAAGCCTCGCCGTTTCGTCAACCTGATCGGCTTCTGCACTAACAACAACAACAAAAATGACAACAAACTCATCGTCGTTGAGTACATGCCAAATGGCTCCCTCTACGACCTCCTCCACTCGAACCCTGTCCAACCGGGTTGGACTCGTCGCATCCGGTTCGCACATCATGTCGCAAAAGCGGTTCACTCACTCCACTCGGCCGAACCGCCGATGATCCACCGAGATATTAAATCATCTAACATTCTTATCGACGATAAATGGAACGCGAGGCTCGGCGACTTCGGGCTTGCACTGAGAGGACACGTGGAAGACGCTCGTTTAAAGTGCACGCCACCGGCGGGGACGTTAGGTTACCTTGACCCGTGCTATCTTGCGCCGGCGGATCTAACCGCCAAGAGCGACGTCTTCAGCTTCGGGATCTTGCTGTTAGAGATAATCAGTGGCCGGAACGCCATAGACTTCAGGCACAGTCCTCCGTCGGTGTTAGACTGGGCGGTTCCGTTGATAAAACGCGGAGATTTCGCCGGACTCTGCGACCAGAGGATCGGCGTGCCGCCGGAGAAGGTGGTGATACGGCAACTCGCGGTAATTGCTGCGAGGTGCGTAAGGTCGATGGCGGAGAAGCGGCCGTCGATGGCGGAGGTGGTGGAGTTGCTTAAATCGGTGAGGAAGAGGATTCACGCGCCGACAATATGGAGTAGCTTGAAGTGGCGCGTGGCAACGCGTGGAGGACCGTTGGGGAGTGATTATGACACGAGTGAAGAAGTTGTGAGGGTAGTTAAGGGTGGGAACAGAAGGAATGGGAAAGTATCCAGTGTGTCGGGTGTAGAGTCTGAAAATGAACCCGGGAAGAATCGAACGGTAAGGTCCAGGTCTATTGGTTCAGGTTTTTTTAGTGAGATTAAAATGAAGTCAGGTTCGGATCCGAACCAAATTGGGCCAAGGTTTGGGAGTAGGGTAGGGAAATTGGGAGTCACGAGGCTCAACAGATCAAGGTCTATGGGGTTTTTGTAA 1314 0.535 MGYLSCNTIATCDPHYRHLKEKTTKHPKTHNNPQLIREFSYSELLAATNNFSSDTFLGKGSYGTVYKATLDAGNLIAAVKITKRHHSAADNEIEILSRVPKPRRFVNLIGFCTNNNNKNDNKLIVVEYMPNGSLYDLLHSNPVQPGWTRRIRFAHHVAKAVHSLHSAEPPMIHRDIKSSNILIDDKWNARLGDFGLALRGHVEDARLKCTPPAGTLGYLDPCYLAPADLTAKSDVFSFGILLLEIISGRNAIDFRHSPPSVLDWAVPLIKRGDFAGLCDQRIGVPPEKVVIRQLAVIAARCVRSMAEKRPSMAEVVELLKSVRKRIHAPTIWSSLKWRVATRGGPLGSDYDTSEEVVRVVKGGNRRNGKVSSVSGVESENEPGKNRTVRSRSIGSGFFSEIKMKSGSDPNQIGPRFGSRVGKLGVTRLNRSRSMGFL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01445 437 MobiDBLite consensus disorder prediction 366 390 - -
Rops9g01445 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Rops9g01445 437 Gene3D Transferase(Phosphotransferase) domain 1 129 332 - -
Rops9g01445 437 SMART serkin_6 51 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01445 437 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Rops9g01445 437 ProSiteProfiles Protein kinase domain profile. 51 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01445 437 FunFam Serine/threonine-protein kinase-like protein 129 332 - -
Rops9g01445 437 Pfam Protein tyrosine and serine/threonine kinase 55 319 IPR001245 GO:0004672|GO:0006468
Rops9g01445 437 SUPERFAMILY Protein kinase-like (PK-like) 33 333 IPR011009 -
Rops9g01445 437 PANTHER OS01G0253100 PROTEIN 27 324 - -
Rops9g01445 437 MobiDBLite consensus disorder prediction 367 390 - -
Rops9g01445 437 Gene3D Phosphorylase Kinase; domain 1 12 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01445 Rops-Chr9 23822159 23824190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01445 37 320 Receptor kinase-like Gene Family AT3G59420 41.156 3.37e-63 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Rops9g01445 PK_Tyr_Ser-Thr 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01445 - - zju:107411142 494.582