Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01441 ATGGCACCCAGTTTCGATTGTGTTTCAAGCCTTCTCTGTGCGGAGGACAACAGCTTTTTTGATGAAAATGATTATGGGGGTTCGGTGGAGATGTTGGAGGAAACATGGCATCATAGATATAATCGAAACCATAATCAATGTCAGCAAAATGGTGACTCAAATGAGTGGTTGCCATTGCAGAGTGATGAGTGTTTGACTCTAATGGTGGAAAAGGAATGCCACCACTTGCCTGGTGGTGATTATGTGAATAGGCTGAGGAGAGGGGATTTGGATTTTGGGGCAAGAAATGAGGCCATGGATTGGATTGAAAAGGTCCGAGAGCATTTTGGTTTTGGACCTCTTTGTGCATATCTATCTATAAACTACTTGGACCGCTTCCTTTCTGCATATGAATTACCAAAGCAAAGAGCTTGGTCAATGCAGTTGTTGGCTGTGGCATGCTTATCTCTGGCAGCCAAAACAGAAGAGACTGAAGTTCCTCTGATTCTTGATTTGCAGGTGGGTGAATCTAAGTTTATATTTGAAGCTAAAACAATACAGAGAATGGAGCTTCTGGTACTAAGCACATTGAAATGGAGAATGCAAGCAATTACTCCTTTCTCTTTCATTGACCATTTCCTTTTCAAGATCAATGATGATCAAGTTCCAAAAGGAGCTTCAATTTTGCAATCCGTCCAACTTATACTGAGTACTCTAAGAGGAATTGACTTCTTAGAGTTCAGACCATCAGAGATTGCAGCAGGAGTAGCAATATCAGTGGTGGGGGAAACCAAAACAGTTCATACTGAGAAAGCAGTTTCTGTTCTGATTCAGCATGCAGAAAAGGAGAGAATATTGAAGTGTGTTAAAATGATCCAAGAGATGTTATCAGGTGGTGGTTCTGCTAAGGATACTAGTGCTTCTGTTTCTGTACCTTGCGTGCCTCAAAGTCCAATAGGGGTGTTGGAAGCTGTATGCTTCAGCTACAAAAGCGATGGCACAAATGCTGGTTCATGTGCAAATTCTTCACATAATAATAGCCCAGATGCTAAACGGAGGAAGCTAAACAAAACCTTTGGAGAATAG 1065 0.416 MAPSFDCVSSLLCAEDNSFFDENDYGGSVEMLEETWHHRYNRNHNQCQQNGDSNEWLPLQSDECLTLMVEKECHHLPGGDYVNRLRRGDLDFGARNEAMDWIEKVREHFGFGPLCAYLSINYLDRFLSAYELPKQRAWSMQLLAVACLSLAAKTEETEVPLILDLQVGESKFIFEAKTIQRMELLVLSTLKWRMQAITPFSFIDHFLFKINDDQVPKGASILQSVQLILSTLRGIDFLEFRPSEIAAGVAISVVGETKTVHTEKAVSVLIQHAEKERILKCVKMIQEMLSGGGSAKDTSASVSVPCVPQSPIGVLEAVCFSYKSDGTNAGSCANSSHNNSPDAKRRKLNKTFGE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01441 354 PANTHER CYCLINS 62 287 IPR039361 -
Rops9g01441 354 FunFam D2/4-type cyclin 78 190 - -
Rops9g01441 354 Pfam Cyclin, C-terminal domain 197 291 IPR004367 -
Rops9g01441 354 SMART Cyclin_C_2 197 323 IPR004367 -
Rops9g01441 354 SUPERFAMILY Cyclin-like 179 289 IPR036915 -
Rops9g01441 354 SMART cyclin_7 100 188 IPR013763 -
Rops9g01441 354 CDD CYCLIN_AtCycD-like_rpt2 197 285 - -
Rops9g01441 354 FunFam D6-type cyclin 191 283 - -
Rops9g01441 354 Gene3D - 67 284 - -
Rops9g01441 354 MobiDBLite consensus disorder prediction 340 354 - -
Rops9g01441 354 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Rops9g01441 354 Gene3D - 78 195 - -
Rops9g01441 354 Pfam Cyclin, N-terminal domain 64 194 IPR006671 -
Rops9g01441 354 MobiDBLite consensus disorder prediction 330 354 - -
Rops9g01441 354 SUPERFAMILY Cyclin-like 56 194 IPR036915 -
Rops9g01441 354 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01441 Rops-Chr9 23705678 23708521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01441 68 333 Core Cell Cycle Gene Families AT2G22490 52.747 3.05e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01441 K18810 - gmx:100803873 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01441 9 23705678 23708521 Rops9g01441 9 23705678 23708521 ECH