Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01440 ATGATGTGGAAATGGGAAGAAGAAGAAGAGTTTCAAGACGATGAAACTACCCCCCAACACGACGATTCCTATCTCAATTTCGATTTCTTCTCTGCTCTCTCCAAACCCAAGGATTATTACAAGATATTGGAAGTGGATTATGATGCATTGGAGGATGCTATTCGTTCTAATTACATTCGTCTTGCTTTGAAATGGCACCCCGACAAACACAAAGACCAGGATGCTTCCACTTCACGCTTTCAAGACATAAACGAGGCCTATCAGGTTCTAAGTGATCCAGTCAAAAGGAGAGAATATGACAAAAACGGGATGCATTACGTTTATGATTACAATATCATAGATTATCTTAACCGTTACAAGGGCCTCATATTGACTTGTAATGGCCTCGGCATAAAGCATTCAATATGGTAA 411 0.399 MMWKWEEEEEFQDDETTPQHDDSYLNFDFFSALSKPKDYYKILEVDYDALEDAIRSNYIRLALKWHPDKHKDQDASTSRFQDINEAYQVLSDPVKRREYDKNGMHYVYDYNIIDYLNRYKGLILTCNGLGIKHSIW* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01440 136 ProSitePatterns Nt-dnaJ domain signature. 80 99 IPR018253 -
Rops9g01440 136 Pfam DnaJ domain 38 100 IPR001623 -
Rops9g01440 136 FunFam Chaperone protein DNAj, putative 30 117 - -
Rops9g01440 136 CDD DnaJ 38 92 IPR001623 -
Rops9g01440 136 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 136 - -
Rops9g01440 136 SMART dnaj_3 37 95 IPR001623 -
Rops9g01440 136 SUPERFAMILY Chaperone J-domain 34 122 IPR036869 -
Rops9g01440 136 ProSiteProfiles dnaJ domain profile. 38 103 IPR001623 -
Rops9g01440 136 Gene3D DnaJ domain 30 115 IPR036869 -
Rops9g01440 136 PRINTS DnaJ domain signature 95 114 IPR001623 -
Rops9g01440 136 PRINTS DnaJ domain signature 40 58 IPR001623 -
Rops9g01440 136 PRINTS DnaJ domain signature 58 73 IPR001623 -
Rops9g01440 136 PRINTS DnaJ domain signature 75 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01440 Rops-Chr9 23679224 23682578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01440 31 100 C2H2 Transcription Factor Family AT1G74250 40.000 4.35e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01440 - - gmx:100804409 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01440 9 23679224 23682578 Rops9g01440 9 23679224 23682578 ECH