Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01434 ATGGAAAAAGCTACCAGAAAACCAAACCAAGCAAACACTCCACACCAAAGCGCTATAGAAAATCTACACCTAATAAAAAGACGCTCAGCAGATTCTTCAGCCTCAGAGCAAAATAAGCAGAGGAGCAAAAGAATCATTGTAACAACTAGAGATAAGCAAGTGCTTAGTAACAAAGTTGACAATGACAGTATATATGAGGCTAAGGCATTAAGCTCTGATGAAGCTAATGAACTTTTCATTTCGAATGCCTTCAAAAAAAATGGTCATGACATGGAGTGGATTGGGCTATCAAGAAGGGTGATTCAGTATGCTAATGAAAACCCATTAGCTTTAAAAGTGTTGGGTTCTTTTCTTTGTGGTAAAAGCAAAAAGGAATATCAAAGCCAATTGCAGAAGCTTAAGAAAATGCATCACCCAAAAATTCAAGATGTATTAAGGTTAAGTTTTGATAGACTTGATCGAGAAGAGAATGACATATTTCTATATATTGCAAGTTTTTTGAAAGGATATGAATTTCAACGAATAATATCTCTTCTTGATGCCTGTGGTTTCTCAACAATTATTGGGTTGAAAGTCCTTCAATACAAAGCCCTCATAATTGAAACCAAGGACTTTGGAAGATCAATTGTATCCATGTATGACTTGATACAAGAAATGGGTTGGCAAATTGTTTGA 675 0.3526 MEKATRKPNQANTPHQSAIENLHLIKRRSADSSASEQNKQRSKRIIVTTRDKQVLSNKVDNDSIYEAKALSSDEANELFISNAFKKNGHDMEWIGLSRRVIQYANENPLALKVLGSFLCGKSKKEYQSQLQKLKKMHHPKIQDVLRLSFDRLDREENDIFLYIASFLKGYEFQRIISLLDACGFSTIIGLKVLQYKALIIETKDFGRSIVSMYDLIQEMGWQIV* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01434 224 SUPERFAMILY "Winged helix" DNA-binding domain 140 224 IPR036390 -
Rops9g01434 224 Gene3D - 69 153 IPR042197 -
Rops9g01434 224 MobiDBLite consensus disorder prediction 21 44 - -
Rops9g01434 224 Pfam NB-ARC domain 39 135 IPR002182 GO:0043531
Rops9g01434 224 MobiDBLite consensus disorder prediction 1 44 - -
Rops9g01434 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 163 IPR027417 -
Rops9g01434 224 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 41 224 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01434 Rops-Chr9 23612839 23613599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01434 45 224 WRKY Transcription Factor Family AT5G45050 34.946 2.76e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01434 - - ccaj:109805840 252.677