Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01420 ATGATTTTGGATTCAGTTTTGTACGGAAATACTACCGGGAAACTCTATGAATATGCCAGTTCCAGTATGAAGGACATGCTTACAAGGTATAATCAGCACTTTCAAGACATCAGCGAATTGGACAGACCTCTAGAGCTGGAGGTAGAAAATAGTAAGGTAGCTGAACTGCGTACGGAAGTTTCTGATAAAACCCAACAACTAAGGAGGATGACGGGTGAGGATTTCCAAGGGTTAAACTTAAATGACTTGGTGCAACTGGAGAAAACACTTGAAACAGGACTCAAGCGCTTGGTTGAGATAAAGGACAAGCATATTATGGATGAGATTGTTGAACTTCAACAAAAGGGAATCAAGTTAGAAGAGGAGAACAAGAATTTAAAGCAAAAGATGGCTATGATGTGCAAGGGAAAAATTCCTTTTCTGGTGGAGTCAGATATTACCATGCAGGAAGTTGTTTCATCAGAGTCTCTGAATAACGTTTGCAGCTGCAATAGTGGCCCATCTCTTGAGGATGATTCCTCTGACACATCTCTTAAGTTAGGGTTGCCCTTCCCTAATTGA 561 0.4082 MILDSVLYGNTTGKLYEYASSSMKDMLTRYNQHFQDISELDRPLELEVENSKVAELRTEVSDKTQQLRRMTGEDFQGLNLNDLVQLEKTLETGLKRLVEIKDKHIMDEIVELQQKGIKLEEENKNLKQKMAMMCKGKIPFLVESDITMQEVVSSESLNNVCSCNSGPSLEDDSSDTSLKLGLPFPN* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01420 186 Coils Coil 109 129 - -
Rops9g01420 186 Coils Coil 46 73 - -
Rops9g01420 186 ProSiteProfiles K-box domain profile. 46 136 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops9g01420 186 MobiDBLite consensus disorder prediction 165 186 - -
Rops9g01420 186 Pfam K-box region 51 130 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01420 Rops-Chr9 23381993 23398871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01420 5 183 MADS-box Gene Family AT4G24540 43.956 1.90e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01420 - - tcc:18591803 196.052