Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01415 ATGGATAAAGAGATCAAGAAGCAAAAGAAGGTTTCTTTCAGCGAAGAAGACGCTGCTACTATTCTTGAGAAGTATGAAGCGAGCACGGTGTTGACGTTGTTGCAGGAAGTGGCGAATTATCCGTATTGGAAGATTGATTGGAACGTGTTGGTGAAGAAAACCAAAACTGGAATTTCTAATGCGAAAGAGTATCAGATGCTGTGGCGTCATTTGGCCTATGGTCATGATTTGATTGAAGATTTTGACGATGATGCTCAACCTTTGGATGATGACAGTGACTTAGAATGTGAACGGGAAGCATTACCATCAGTAGACCAGGAAACTGCATCGGAAGCTGCAGCATGTGTGCAGGTAATGATTGAATCTCTCGTGATGAGCGAATCCCCCCCTACTACCTCGTTCATGACAGCTCCATTGACTATAAATGTTCCAGTTTGTGGTTCATCTAGAATTCCTAGCGGAAGTTCTGAACCCTCTAGTTCGATGCAGAGGACAAACATTGTTTTTCCAGTTTCTGTTCAGAGACACACACGGTCCAATGTATCTTCAACTAGAGCTATAAAAAACAATGGATTAGTTAGTGGTAACACATCTATTAACAAGAAAAGAAAAACATGGACAGAGGAAGAGGACATGCAACTAGAAGCTGCTGTTCAGAGGTGGGGTGAAGGAAATTGGGCAGCCATGGCTGAAAGAGATGACTTTTCTCTTGACAAAAGTCCTTCACAGTTGTCTAAGAGGTGGAGCACTTTACGAAAGAAAGGTGGCAGCACCAATTGA 780 0.4269 MDKEIKKQKKVSFSEEDAATILEKYEASTVLTLLQEVANYPYWKIDWNVLVKKTKTGISNAKEYQMLWRHLAYGHDLIEDFDDDAQPLDDDSDLECEREALPSVDQETASEAAACVQVMIESLVMSESPPTTSFMTAPLTINVPVCGSSRIPSGSSEPSSSMQRTNIVFPVSVQRHTRSNVSSTRAIKNNGLVSGNTSINKKRKTWTEEEDMQLEAAVQRWGEGNWAAMAERDDFSLDKSPSQLSKRWSTLRKKGGSTN* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01415 259 Gene3D - 196 255 - -
Rops9g01415 259 MobiDBLite consensus disorder prediction 241 259 - -
Rops9g01415 259 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 259 - -
Rops9g01415 259 ProSiteProfiles Myb-like domain profile. 198 252 IPR001005 -
Rops9g01415 259 SUPERFAMILY Homeodomain-like 200 252 IPR009057 -
Rops9g01415 259 MobiDBLite consensus disorder prediction 233 259 - -
Rops9g01415 259 CDD SANT_TRF 204 253 - -
Rops9g01415 259 SMART sant 202 254 IPR001005 -
Rops9g01415 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 198 256 IPR017930 -
Rops9g01415 259 Pfam Myb-like DNA-binding domain 203 251 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01415 Rops-Chr9 23275993 23280668 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops9g01415 Myb_DNA-binding 3.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01415 - - gmx:100799956 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01415 9 23275993 23280668 Rops9g01415 9 23275993 23280668 ECH
Rops9g01415 9 23275993 23280668 Rops10g01722 10 32179690 32186327 PCT