Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01411 ATGAGCGAGGAAGAAGAGAAGAAGATGTGTCTTTTCACGGGAACGAACACTCACTTCTCAGGTTTTCTTCTTGACCCTGCAAAATGTGGGATGCTGAATTTGCAAGACAAACAAAGACTAGTCCATGAGATTGCTCGACAGTCAAAAGATGCCCCAAACATGCTTCAGTCATTTACTCGTAAGGAACTTCTAGAAATAATCTGTGCTGAACTAGGCAAAGAAAGGAAGTACACAGGATATACTAAGAGTCAAATGATAGAACATCTTCTGAAGATAATTTCTAAGAAATCCAACTTGCATGTCAACCAAAATACTCTTACCCATTCTCCTGCCAAAAGTTGTATTGGATCTAAAAGGAGAAAGGGAGCTCCATCTCCAGATTTACATTGTGCTCCTCTAGAGAACAATAAGGAGGAAACAGTGAACATCTTAGTGTGTCAGAATGTTGCATGCAGAGCTACATTGAATCCAGAAGATTCTTTTTGCAAGAGATGTTCTTGTTGTATATGTCATTGTTATGATGATAACAAGGACCCGAGTTTGTGGTTGACCTGCGGCTCTGATAATCCCAATGAGGAGTCATGTGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAATGTCTGGCATTTTGAAGGGCAGTCGTGGTATCACCTTGGATGGAAGCTTCTATTGTGTTTCTTGTGGAAAAATTAATGAATTAATGAGTACATGGCGAAAGCAATTATTGGTTGCCAAAGAGGCAAGAAGAGTGGATATACTCTCTTTGCGGATATCCTTGGCCCACAGAATTCTCATAGGAACAGAAATCTACAAGGAAGTGCAGAAGATTGTAGAAACTGCTCTCAGATTACTGGAGAATGAATTGGGACCTCTGGATCATGTATATGCTAGGATGACACGTGGAATTGTAAGCAGGCTCTCGTGTGGTGCAGAGGTCCAGAAGTTGTGCTCTACTGCAGTTGAATATTTTGATTCAAAGTTTTCTGACCTCTTCTCTAATTGTGCAGAAAAGAAAGATGCACCAACATGCTCTATACGTTTTGAAGAGTGTCTTCCTACCTCAGTGGTCATTGTGCTAGAATACAGAGATAAACTTTTAAAGAACTTTCTAGGCTGCAGACTTTGGCACCGAATATCAACAATGGACTACCAAGAACAACCCACCTTCATTGTTTTAAGGCCTGAGAAAAGATTCAAGTTAGAAAACCTCCATCCTTCAACTGAGTACTCTTGCAAGGCTTCTCTATTCAGCAGTACAGGGACTTTGGGTGCAGCAGAAGCTAAATGGGTTACACCTTGTGAACCCACAAATTCTCCTTCAAAAGTTATCAGACATGGTGGGAATTATTCAAGGGGTACAGCTGTGGATATACATGCATTGGACCAAATTAAGATAACTGCTGAAAATCATCAGGTAGAATCTGCCAATTCTGATGTAAAGTTATCACCTGGAGACCATCCTGCAAAACACATATTTATGAACAACAGGGGCAGATTTGAAGAGTTCCTCACCAAGCCTCCATCAGTGGAACCTTTTTCATATAAAAATTTTGCAGCAGTTTCACCTTCCACACCTTCTAAATCCAATGAAATGAGGCAAATTACTGGTTTGAGTTCCAGAAAGCGCTTGAACGAAAACGAATATGAGTATTCTGTCAGAGTAGTCAAATGGTTAGAGCTTCAAGGGCACATAGATGAAATCTTCAGAGTGAAATTTCTCACTTGGTTCAGCCTCAAGGCCACTCAGCAGGAGAGAAGGGTGGTTAGTGCGTTTGTTGATGCACTGATCGATGACCCAGCAAGCTTAGCAGACCAGCTCATACACACTTTCACGGACGTGATATATTGCGAGCAAAAACCTTAG 1872 0.4103 MSEEEEKKMCLFTGTNTHFSGFLLDPAKCGMLNLQDKQRLVHEIARQSKDAPNMLQSFTRKELLEIICAELGKERKYTGYTKSQMIEHLLKIISKKSNLHVNQNTLTHSPAKSCIGSKRRKGAPSPDLHCAPLENNKEETVNILVCQNVACRATLNPEDSFCKRCSCCICHCYDDNKDPSLWLTCGSDNPNEESCGMSCHLQCALSNQMSGILKGSRGITLDGSFYCVSCGKINELMSTWRKQLLVAKEARRVDILSLRISLAHRILIGTEIYKEVQKIVETALRLLENELGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAVEYFDSKFSDLFSNCAEKKDAPTCSIRFEECLPTSVVIVLEYRDKLLKNFLGCRLWHRISTMDYQEQPTFIVLRPEKRFKLENLHPSTEYSCKASLFSSTGTLGAAEAKWVTPCEPTNSPSKVIRHGGNYSRGTAVDIHALDQIKITAENHQVESANSDVKLSPGDHPAKHIFMNNRGRFEEFLTKPPSVEPFSYKNFAAVSPSTPSKSNEMRQITGLSSRKRLNENEYEYSVRVVKWLELQGHIDEIFRVKFLTWFSLKATQQERRVVSAFVDALIDDPASLADQLIHTFTDVIYCEQKP* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01411 623 Pfam PHD - plant homeodomain finger protein 146 265 IPR032881 -
Rops9g01411 623 CDD PHD_VIN3_plant 166 230 - -
Rops9g01411 623 PANTHER VIN3-LIKE PROTEIN 2-RELATED 22 446 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01411 Rops-Chr9 23215648 23220804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01411 24 617 PHD Gene Family AT5G57380 33.116 1.99e-101 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01411 - - gmx:100785502 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01411 9 23215648 23220804 Rops9g01411 9 23215648 23220804 ECH