Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01409 ATGCCTCACAGAGTTACTTACTTTTTCCCGAGGCAGTTTTCGGAAAGAGGGTTGGATGAATCTTCGAAGCAGATATTAGATCACGAGAAGAAAAAAATTGTCAACTCTGTCAAATCATCATCAGATACTTTTGGTGTTGAAAACGACACGCCGAAAAGCTCGACTCTAACGACACGAAGCCTCTCTCCTCCTACCGAGGACGACGTCGTTTTCTCCCCGGAAAGACACTCAGCGGTTTCCGACCTTTTCACCGGCGGCGAGAAGTACAGAACAAAGCAGAAGCAAATTTCCGCTTTCTGCAATTGGTTTATCGATAAAAAAGGGAATCGGAACCGATCCGGTAACCGCCTCAAGTTTCACACAAACCGTGAGGATGAAGAGGCCCACGAGCTTCTGCTTCCGCAGGCTGCGACTGCTGCGACTCCGGTCAAGGATGCCGTCGACCAGCAAGCTTCGCTGCAGCGGTTGTCTAGTGGAAGCAGCTATGCAGGAAGCTTGTTCACGTTGGATGGCACCGCCACTTTTTCAAGCGACATTACCAAAGACAATACGTCGTCGTCTCGAGTCTCCACCGTCGACGTAACAAGAAGGCACGAACAGGAACAAGAAGGAGAAGGAGAAGGAGAAGGTTACGCTAGAAAGTACAAAGAAAGCTACCTCTTACAACTGGCGTTGACGAAGAGGCTTTCTTTCTTAGCAAGCCTTGGTTCTGAGCCTGTTCTCACTTTCGACACTGGACTCGAAACGTGGGATGCTGAATCCGCTTCTCGTCGTTTATGGGTGACGGGGTGTTTGTCATACACGGACAAGATTGCGGATGGTTTTTATAACATATTGGGGATGAACCCGTATTTGTGGGTGATGTGTAATGACGTGGAGGAAGAAGGGAACTTCCTCCCTACTCTTATGGCGCTGAAAGCAGTTGAACCCAGTGAGACTTCAATGGAAGTAGTTCTTATAGATAGACGCGAGGATAATAGACTTCAGGAACTTCAAGATAAAGCTCAAGAGTTGTATTCCGCTTCGGAGAATGCCTTGGTGTTGGTTGAAAAGCTAGGAAAACTTGTTGCTATTTGTATGGGGGGTAGGTTCCCGGTGGAGCAAGGAGATCTACAAAAGAGGTGGAAGTTGGTTAGTAAGAGGTTGAGGAACTTTCATCAGTGTGTTGTGCTTCCCATTGGTAGCTTATCTACAGGACTCTGTAGGCATCGCGCTATTCTCTTCAAGAGATTGGCAGATTACATAGGTTTGCCATGTCGAATTGCTCGAGGTTGCATGTACTGTGCTTCCGATCATAGATCCTCTTGCCTTGTCAAGATTAAAGATGACAGGCAGTTCTCAAGGGAATTTGTTGTTGACCTGGTTGGGGAACCAGGAAACATCCACGGGCCAGATTCCTCAATTAACGGAGCATATGTGTCTTCCATACCTTCCCCATTTCAAATTTCTCATTTGAGAGAATCTCAGTTGCCCTATGTGGATGACGCAGCGTTTGATCAATCTATAAGATTTAATCACGGTTTTATTATTCCCGAAAATCACCTGTATTCAGGTCATGTACAGGAAGATCAACAAGTTAAAGAAACTGACTTGCTCAAAAATAATAATGGATCCATTTATGCTTCAGTTGATCAAACTTGTGGAGGTGTTTCTGAAGCTCTTCATCCAACCTCTGAAGCATTATTACATGAATATCCCAAGCTTTGTAAAGATTCAGTTGTAGTACAAGAAACTTCCAACAATGAGATCGTTGTAAATGAAAGTTCTGGGGTAAAAAGTAACTTAAAGCAATCTATACTGAGCTCATCCAGCCCGTCAAAACAGGAACAGGTAAACAATAAACTTGAAAACCAAGGTGCTGGGAATATTCCAAGATACTTAAATCTTGAACCATCACTGGCAATGGACTGGCTTGAGATATCGTGGGATGATTTACGAATCAAAGAGCGTGTTGGTGCTGGATCATTTGGGACAGTGTACCGTGCTGAATGGCATGGATCAGATGTTGCTGTCAAGGTTTTATCAGTTCAGAATTTCCATGATGATCTGTTGAGAGAGTTTTTGAGAGAGGTTGCAATAATGAAACGTATTCGCCATCCAAATGTTGTGCTCTTCATGGGTGCAGTTACAAAACGTCCCCATCTATCTATAGTGACAGAGTATTTGCCTAGAGGTAGTTTATTCCGCCTGATACATAGGCCAGCATCCGGTGAAATTCTAGAACCAAGGAGAAGATTACGGATGGCTTTAGACGTGGCCAAAGGGATCAATTATCTCCACTGTCTGAAGCCTCCAATCGTGCACTGGGATCTCAAATCCCCAAATCTGTTAGTAGACAAAAATTGGACTGTAAAGGTGTGTGATTTTGGATTGTCCAGATTTAAGGCAAACACTTTCTTATCATCAAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCAGAATTTCTTCGCGGAGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTTATCCTGTGGGAACTCGTGACCTTGCAACAACCATGGAATGGACTTAGCCATGCCCAGGTGGTCGGAGCTGTGGCTTTCCAGAATAGGAGGCCTGCTATCCCTCCAAACATCTCCCCAGTATTGGCCTCTCTCATGGAATCTTGTTGGTCCGATGACCCTGCTGGTCGCCCATCTTTTGCTAGCATAGTTGAGTCGCTAAAGAAGCTACTTAAGTCACCAGCTAATACAATAAAAATGGGTGGGAAATAA 2748 0.4476 MPHRVTYFFPRQFSERGLDESSKQILDHEKKKIVNSVKSSSDTFGVENDTPKSSTLTTRSLSPPTEDDVVFSPERHSAVSDLFTGGEKYRTKQKQISAFCNWFIDKKGNRNRSGNRLKFHTNREDEEAHELLLPQAATAATPVKDAVDQQASLQRLSSGSSYAGSLFTLDGTATFSSDITKDNTSSSRVSTVDVTRRHEQEQEGEGEGEGYARKYKESYLLQLALTKRLSFLASLGSEPVLTFDTGLETWDAESASRRLWVTGCLSYTDKIADGFYNILGMNPYLWVMCNDVEEEGNFLPTLMALKAVEPSETSMEVVLIDRREDNRLQELQDKAQELYSASENALVLVEKLGKLVAICMGGRFPVEQGDLQKRWKLVSKRLRNFHQCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCMYCASDHRSSCLVKIKDDRQFSREFVVDLVGEPGNIHGPDSSINGAYVSSIPSPFQISHLRESQLPYVDDAAFDQSIRFNHGFIIPENHLYSGHVQEDQQVKETDLLKNNNGSIYASVDQTCGGVSEALHPTSEALLHEYPKLCKDSVVVQETSNNEIVVNESSGVKSNLKQSILSSSSPSKQEQVNNKLENQGAGNIPRYLNLEPSLAMDWLEISWDDLRIKERVGAGSFGTVYRAEWHGSDVAVKVLSVQNFHDDLLREFLREVAIMKRIRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLFRLIHRPASGEILEPRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFLSSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTLQQPWNGLSHAQVVGAVAFQNRRPAIPPNISPVLASLMESCWSDDPAGRPSFASIVESLKKLLKSPANTIKMGGK* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01409 915 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 176 902 - -
Rops9g01409 915 Gene3D Transferase(Phosphotransferase) domain 1 724 911 - -
Rops9g01409 915 MobiDBLite consensus disorder prediction 179 209 - -
Rops9g01409 915 ProSitePatterns Protein kinases ATP-binding region signature. 651 672 IPR017441 GO:0005524
Rops9g01409 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Rops9g01409 915 FunFam Serine/threonine-protein kinase CTR1 724 909 - -
Rops9g01409 915 PRINTS Tyrosine kinase catalytic domain signature 719 732 IPR001245 GO:0004672|GO:0006468
Rops9g01409 915 PRINTS Tyrosine kinase catalytic domain signature 760 778 IPR001245 GO:0004672|GO:0006468
Rops9g01409 915 PRINTS Tyrosine kinase catalytic domain signature 870 892 IPR001245 GO:0004672|GO:0006468
Rops9g01409 915 PRINTS Tyrosine kinase catalytic domain signature 826 848 IPR001245 GO:0004672|GO:0006468
Rops9g01409 915 FunFam Serine/threonine-protein kinase isoform 1 635 723 - -
Rops9g01409 915 CDD STKc_MAP3K-like 651 899 - -
Rops9g01409 915 Gene3D Phosphorylase Kinase; domain 1 638 722 - -
Rops9g01409 915 SUPERFAMILY Protein kinase-like (PK-like) 623 898 IPR011009 -
Rops9g01409 915 MobiDBLite consensus disorder prediction 40 65 - -
Rops9g01409 915 ProSiteProfiles Protein kinase domain profile. 645 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01409 915 MobiDBLite consensus disorder prediction 40 68 - -
Rops9g01409 915 Pfam Protein tyrosine and serine/threonine kinase 645 899 IPR001245 GO:0004672|GO:0006468
Rops9g01409 915 SMART serkin_6 645 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01409 915 MobiDBLite consensus disorder prediction 192 209 - -
Rops9g01409 915 Pfam Ethylene-responsive protein kinase Le-CTR1 252 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01409 Rops-Chr9 23190520 23198469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01409 1 914 MAP Kinase Kinase Kinase AT4G24480 56.594 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Rops9g01409 PK_Tyr_Ser-Thr 8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01409 - - gmx:100786546 1387.47