Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01399 ATGGGGGAAGAACTGTCAGGTTTGACAGTCAAAGAATTACAGAGTTTGGAGAACCAACTAGAGATAAGCCTTCGTGGTGTCCGTATGAAAAAGGACCAACTTTTAATGGATGAAATACAAGAACTAAATCGAAAGGGAAACCTCATACACCAAGAAAATGTAGAACTGTATAAGAAGGTCTATGGAACAAAAGATGAGAATGGACCAAACAAAAATTCTGTTCTCACAAGTGGTCAAGGCATAGGAGAGGATTTGCATGTGCCAGTGAATCTCCAGCTAAGCCAGCCACAGCAACAACACTACAAGCCACCTTCAGGAACTACAAAATTGGGGTATGATCTTTATCATGTAGCTGATAGATCATTAATCATGATCCAAAAGCATTGA 387 0.3979 MGEELSGLTVKELQSLENQLEISLRGVRMKKDQLLMDEIQELNRKGNLIHQENVELYKKVYGTKDENGPNKNSVLTSGQGIGEDLHVPVNLQLSQPQQQHYKPPSGTTKLGYDLYHVADRSLIMIQKH* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01399 128 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops9g01399 128 ProSiteProfiles K-box domain profile. 1 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01399 Rops-Chr9 22922127 22922827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01399 1 112 MADS-box Gene Family AT3G57230 52.381 4.44e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01399 K09264 - gmx:100812413 192.586