Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01393 ATGGTGTTGAGGAAAGTGGGCAAGTATGAGATTGGAAGAACCATTGGAGAAGGGACCTTCGCGAAGGTCAAGTTCGCTCAGAACACAGAAACTGGTGAGAGTGTTGCCATGAAGGTTCTCGACCGTAGCACCATCATCAAGCACAAAATGGTCGACCAGATAAAGAGGGAGATTTCTATTATGAAGCTAGTCAGACATCCATATGTTGTTCGTCTGTATGAGGTTCTTGCAAGCCGTACTAAGGTTTATATCATATTGGAGTTCATCACAGGTGGCGAATTGTTTGATAAAATTGTACACCATGGGCGTCTAAGTGAAGCTGAATCTAGAAGATTCTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAAGGAGTTTATCATCGAGACTTAAAGCCTGAAAACCTTTTACTTGATTCACAAGGAAATATAAAAATTTCAGATTTTGGTTTGAGTGCATTGCCAGGACAGGGGGTTAGTATGCTTCGGACAACTTGTGGGACTCCTAATTATGTAGCTCCTGAGGTACTCCGTCACAAGGGTTATAATGGTGCTCCAGCTGATGTTTGGTCCTGCGGGGTTATCCTCTACGTTCTAATGGCTGGATATCTTCCCTTTGATGAGCTCGATCTAACTACGTTATACAATAAGATTGAGAAAGCAGAGTTTTCATGCCCTCCTTGGTTTCCTTTGGGAGCAAAATCTTTGATACATAGAATTTTGGACCCAAATCCTGAACATCGTATAACCATTCAACAGATTAGAAATGATGAGTGGTTTCAAAAAGACCATGTTCCCGTTCATCTCCTCGAGTATGAAGATGTAAATCTAGATGATGTAAATGCTGCATTTGACAATGATGAGGATCAGACGGCTAATCAGCAATGTGAGAATGAGGACATGGGTCCTCTAAATCTTAATGCTTTCGACATGATAATTTTATCTCAAGGCTTAAACCTTGCAACACTCTTTGATCGTGGACAGGACTCTATGAAATACCAAACGCGCTTTATCACTCAAAAGCCAGCAAAGGTGATTTTATCAAGTATGGAAGTAGTGGCACAATCAATGGGATTTAAGACGCACATTCGCAATTACAAGATGAGAATAGAGGGCATTTCAGCAAATAAGACTACTTATTTCTCAGTTATACTTGAAGTTTTTGAAGTTGCTCCCACATTTTTCATGGTAGACATTCAGAAAGCAGCTGGAGATGCAGGTGAATATCTCAAGTTTTACAAGAAATTTTCTAGCAATCTTGAGGATATCATCTGGAAACCACCTCCTGAAACAAGAAATTAA 1308 0.4014 MVLRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQIKREISIMKLVRHPYVVRLYEVLASRTKVYIILEFITGGELFDKIVHHGRLSEAESRRFFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSALPGQGVSMLRTTCGTPNYVAPEVLRHKGYNGAPADVWSCGVILYVLMAGYLPFDELDLTTLYNKIEKAEFSCPPWFPLGAKSLIHRILDPNPEHRITIQQIRNDEWFQKDHVPVHLLEYEDVNLDDVNAAFDNDEDQTANQQCENEDMGPLNLNAFDMIILSQGLNLATLFDRGQDSMKYQTRFITQKPAKVILSSMEVVAQSMGFKTHIRNYKMRIEGISANKTTYFSVILEVFEVAPTFFMVDIQKAAGDAGEYLKFYKKFSSNLEDIIWKPPPETRN* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01393 435 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01393 435 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01393 435 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Rops9g01393 435 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01393 435 Gene3D Kinase associated domain 1, KA1 302 428 - -
Rops9g01393 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 413 - -
Rops9g01393 435 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Rops9g01393 435 FunFam Non-specific serine/threonine protein kinase 302 428 - -
Rops9g01393 435 CDD CIPK_C 309 424 - -
Rops9g01393 435 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Rops9g01393 435 FunFam Non-specific serine/threonine protein kinase 2 303 - -
Rops9g01393 435 SUPERFAMILY Protein kinase-like (PK-like) 6 275 IPR011009 -
Rops9g01393 435 Pfam NAF domain 305 363 IPR004041 GO:0007165
Rops9g01393 435 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Rops9g01393 435 Gene3D Transferase(Phosphotransferase) domain 1 89 270 - -
Rops9g01393 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01393 Rops-Chr9 22857780 22863756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01393 1 388 CBL-interacting serine-threonine protein kinases AT4G24400 82.732 0.0 678
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops9g01393 Pkinase 5.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01393 - - gmx:100816735 803.127