Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01391 ATGGAGAACAATTCTCGCGATTCCTCACCTCACTCTCGCGAGATGGAAAACGAAAACTCCTCCTTCGAAGAACCACCTCCTTCCAACACCTACAAAGTCAAGTTCATGTGCAGCTATGGCGGAAAAATCCAACCCAGGCCACACGATAACCAACTCACCTACGTCGGCGGCGACACTAAAATCATCGCCATCGACCGGAATATCAAATTCTCCGCCGTCATGGCGAAGCTAACTTCACTTGCCAACGCCGACGTGTGCTTCAAGTACCAACTCCCCGGCGAGGATCTCGACGCGTTAATCTCCGTCACCAATGAAGAAGATCTCGACCACATGATGGTAGAGTATGATCGCCTGTATCGCGCTTCACCTAGACCTGCAAGGTTGAGGCTCTTCCTCTTCCCTATCAACAATGCATCTTCCATGAATCTCGGTTCCGCTGAATCGAAACCGGAGCGGCAATGGTTCGTGGATGCTCTGAATTCAGTTCAGGTTCCGGTTCTAGAAAGTTCTTCTCCGCCGCCTGTTCAGCCGGTGAATCCGGATTTTCTGTTTGGATTAGATAAGGCCGTTCCCGAAGCGAAACAGGCGGAGTTCGTTACGGTTCCGGAAATTTCGGCGAAAGATTCGGAGTATGGGTCCGAGGATCGGCAAACGGTTAGAGAATCTGAGATTCTGGAGCTTCAGAAGTTTCAGCTTGGGAACAACAACGAGCGGAAAAACGATGAAGAAAACGGCAGAGCTTACGGTGCTGACTATAACACTCAGAAAAACTCGGAGAAAGTCACGCCGTTAATTCCACATGCACCTGCTCAAGCCCATTCCGGTTCGATTCCGGTTCAGGTTCCTGGACCGATGCCGGTTCATGCGTCGTTTTTGCCAGAGAGGCATAACCCTTACTCATTGGCGATTTCTGCAAATGGAACCGAACCGATTCCGGTTTATTTGATCCAAACACCTTCTGGAATGTACCAAGCCGTGCGACCCGTAACTGGACCGGTGGGTCAACCGGTTTATTTCATTCCACCACCGACTTCGGTTTCACAATCGGCGCAAAAGATTGGTTACAATGGTTCGGAGGTTGGTGAGGTTTCTGAGCGTGGCTATTCTCAGGTTGCGTACTTGCCTGACAGGTCAGCTTTACGGCGGCAGGCTGCGGCGGCGCCCGGCGGTGAGAGGTGGAATTGA 1185 0.5139 MENNSRDSSPHSREMENENSSFEEPPPSNTYKVKFMCSYGGKIQPRPHDNQLTYVGGDTKIIAIDRNIKFSAVMAKLTSLANADVCFKYQLPGEDLDALISVTNEEDLDHMMVEYDRLYRASPRPARLRLFLFPINNASSMNLGSAESKPERQWFVDALNSVQVPVLESSSPPPVQPVNPDFLFGLDKAVPEAKQAEFVTVPEISAKDSEYGSEDRQTVRESEILELQKFQLGNNNERKNDEENGRAYGADYNTQKNSEKVTPLIPHAPAQAHSGSIPVQVPGPMPVHASFLPERHNPYSLAISANGTEPIPVYLIQTPSGMYQAVRPVTGPVGQPVYFIPPPTSVSQSAQKIGYNGSEVGEVSERGYSQVAYLPDRSALRRQAAAAPGGERWN* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01391 394 PANTHER OS05G0427100 PROTEIN-RELATED 4 308 - -
Rops9g01391 394 MobiDBLite consensus disorder prediction 1 20 - -
Rops9g01391 394 CDD PB1_UP2 36 133 - -
Rops9g01391 394 SMART PB1_new 47 135 IPR000270 GO:0005515
Rops9g01391 394 MobiDBLite consensus disorder prediction 1 29 - -
Rops9g01391 394 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 52 135 - -
Rops9g01391 394 SUPERFAMILY CAD & PB1 domains 48 142 - -
Rops9g01391 394 Pfam PB1 domain 48 134 IPR000270 GO:0005515
Rops9g01391 394 Gene3D - 53 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01391 Rops-Chr9 22846886 22848459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01391 31 162 MAP Kinase Kinase Kinase AT5G57610 41.791 2.41e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01391 - - pcin:129294124 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01391 9 22846886 22848459 Rops9g01391 9 22846886 22848459 ECH