Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01377 ATGCCGAATCCCGAGGCTGAGTCTCACCGTAACCAACACCGGTCCAGAACTCGACCGTCCACGTCAGCGGCTCGACCGGTTGTCCGGTCGAGAATTCCGTTACGGCAGTTACTTCGTGTTGCTTCGGTGGCGAGTGGTATTCAATTCGGTTGGGCTTTGCAACTGTCTCTGTTAACGCCATATGTTCAACAGTTGGGGATTCCTCATCAATGGGCCAGTATCATATGGCTCTGTGGCCCAGTTTCTGGACTCTTCGTTCAGCCTTTAGTGGGCCACATGAGTGATCGGTGCACTAGCAGGTTCGGTCGCCGGAGACCGTTTATTTTGGTCGGTGCGGCGTCGATAGTCGCCGCCGTTATCATCATCGGTTACGCCGCCGATATCGGATGGTTGCTTGGAGACACCGAGAGTTATCGGCCTGCGGCGATAACCGTTTTTGTTATCGGGTTTTGGATTTTGGATGTTGCTAATAACGTCACTCAAGGTCCTTGTAGAGCTTTGCTCGCTGATCTCACTAGAAATGATTCTCGGAGGACACGTGTTGCGAATGCTTATTTCTCCCTGTTTATGGCTGTTGGTAACATTCTTGGCTATGCAACTGGATCATACAGTGGTTGGTACAAGGTTTTTACTTTCACACGTACCCCTGCATGCACCATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTGGATGTTGCTTTCATTGTGGTCACGACATATTTCAGCATCATGGCAGCTCATGAAGTGCCTCTAAATTCAAGTGAGGCAGCCCATGCAGAAGGGGCAGGGGGTGGTGCTGAAGAAGCTTTCATGTGGGAATTATTTGGGACATTCAGATATTTTTCAACCCCTATATGGATAGTACTGTCTGTAACTGCTCTGACATGGATTGGGTGGTTCCCATTTATTCTCTTTGATACTGATTGGATGGGTCGAGAAATTTATGGGGGTGATCCAAATGGAGGCCTTAATTACGATACTGGAGTTAGAATGGGAGCACTGGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACATCATTGCTCATGGAGAGGCTATGCAGAAAGAGGGGGGCCGGTTTTGTGTGGGGAATCTCAAATATCTTAATGGCTGTTTGCTTTCTTGCAATGTTAGTAGTAACCTATGTGGCATATAACATTGGCTATGTAGGCAAAGGTCTATCACCACCAATTGGCATTGTGATAGCCGCGTTGATAATCTTTACCATTCTTGGGTTTCCATTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCCACACATATTGAACCATTGGGACTTGGCCAAGGGTTATCAATGGGTGTCCTGAATCTGGCAATCGTGATCCCACAGATAGTGGTGTCCCTGGGAAGTGGGCCATGGGATCAGCTATTTGGTGGAGGAAACTCCGCAGCCTTTGCTGTGGCAGCCGTGGCAGCCCTTATAAGTGGACTCATAGCTGTCTTGGCTATTCCTCGATCTGGTGCCCAAAAGGCTCGAAGCCGTGTATGA 1518 0.4783 MPNPEAESHRNQHRSRTRPSTSAARPVVRSRIPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHMSDRCTSRFGRRRPFILVGAASIVAAVIIIGYAADIGWLLGDTESYRPAAITVFVIGFWILDVANNVTQGPCRALLADLTRNDSRRTRVANAYFSLFMAVGNILGYATGSYSGWYKVFTFTRTPACTISCANLKSAFFLDVAFIVVTTYFSIMAAHEVPLNSSEAAHAEGAGGGAEEAFMWELFGTFRYFSTPIWIVLSVTALTWIGWFPFILFDTDWMGREIYGGDPNGGLNYDTGVRMGALGLLLNSVVLGITSLLMERLCRKRGAGFVWGISNILMAVCFLAMLVVTYVAYNIGYVGKGLSPPIGIVIAALIIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVIPQIVVSLGSGPWDQLFGGGNSAAFAVAAVAALISGLIAVLAIPRSGAQKARSRV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01377 505 PANTHER SUGAR TRANSPORTER 31 491 - -
Rops9g01377 505 MobiDBLite consensus disorder prediction 1 26 - -
Rops9g01377 505 Pfam MFS/sugar transport protein 52 432 - -
Rops9g01377 505 NCBIfam sucrose/proton symporter 32 496 IPR005989 GO:0005886|GO:0008515|GO:0015770
Rops9g01377 505 FunFam Sucrose transport protein 31 493 - -
Rops9g01377 505 SUPERFAMILY MFS general substrate transporter 35 496 IPR036259 -
Rops9g01377 505 Gene3D MFS general substrate transporter like domains 34 493 IPR036259 -
Rops9g01377 505 CDD MFS_SLC45_SUC 37 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01377 Rops-Chr9 22516197 22532863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01377 1 500 Sucrose Transporter Gene Family AT1G09960 70.020 0.0 700
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01377 K15378 - gmx:100820483 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01377 9 22516197 22532863 Rops9g01377 9 22516197 22532863 ECH