Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01373 ATGGCAAGCAATAAGACAAAGGAAACTCCACCAGAAACCATGGAAGAGGTCTTGAATTCTATTAAGCAAGCTTGTAAATTGGTAAGAAACCTTGAACCAGAACTACCCAACATGGCAAACCACCCTGATATGCTATTCGTGTCCATTGATGAGGTAGTGAAGGAATTTGGTTCTGCCAAAGAAAGGGTAATGATGATATTGTCACAACAACAAGGCCTAACAATAACACCTTCACCTTCTTCTTTTGCTCCAATGCCACTTCATGATGCTTTCAAGCAGGAAACTCAGCAGCCTCAGACTTTGGATCAGTTTCTTCTAATGCAGCAACCCTTTGATGTGAGGGCTTTGCTTGAAAACAAGATGATAAGTGGTGGTGATGTTCAGCAGTTAAGGTATAGGGGCACCTTGAGGATTGGTGAAATGAGTGGAAGGGATGTGGAAGGTTCTGAGAGATCAAAGGGGTCTGAAGGAGAAATGCAAGGAATAGAAGCATCACCATCACGATCAAGAAAAAGCAGGAAGAATGAATTGGAGAAGAAAACAATGATGATTCCAGCACCACAGGTTGGAAACACAGAGATGCCACCAGATGATGGTTTCACTTGGAGAAAATATGGCAATAAAGAGATACTGGGCAAAAAATACCCAAGGGCTTACTACAGGTGCACCCACCAGAAATTATATGGGTGCTCAGCAAAGAAGCAAGTACAAAGACTAGATGAAAATCCTAAAATATTTGAAGTAACATACAGAGGTGAACATACCTGTCACATGTCCTCAACAGCACCATCATCATATCCACCATCACAACTACTAGTGGATATCTCAAGGGACATGACTCAATCCACCATTTCACCCCAATTGTCTCCATCATCAACCTCAGTCTCAGGGTGGCTTTCTTCAGTGAACCTCAGCCTCAAGAGTAGTGGTGGTGCTGGACCCTCTACTTCAAAATATGCCACTGATTATCCAGTAGCTGATATGGCTGATGCTATGTTCAACTCAGGTAGTAGCAGTGGCAACAGTATGGAATCTCTCTTTCCTTCAACTGAAGTTAAATGGGAACCAGGTGAGAAGAAAAGCTGA 1086 0.4273 MASNKTKETPPETMEEVLNSIKQACKLVRNLEPELPNMANHPDMLFVSIDEVVKEFGSAKERVMMILSQQQGLTITPSPSSFAPMPLHDAFKQETQQPQTLDQFLLMQQPFDVRALLENKMISGGDVQQLRYRGTLRIGEMSGRDVEGSERSKGSEGEMQGIEASPSRSRKSRKNELEKKTMMIPAPQVGNTEMPPDDGFTWRKYGNKEILGKKYPRAYYRCTHQKLYGCSAKKQVQRLDENPKIFEVTYRGEHTCHMSSTAPSSYPPSQLLVDISRDMTQSTISPQLSPSSTSVSGWLSSVNLSLKSSGGAGPSTSKYATDYPVADMADAMFNSGSSSGNSMESLFPSTEVKWEPGEKKS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01373 361 MobiDBLite consensus disorder prediction 141 179 - -
Rops9g01373 361 Gene3D WRKY domain 186 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01373 361 ProSiteProfiles WRKY domain profile. 197 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01373 361 SUPERFAMILY WRKY DNA-binding domain 193 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops9g01373 361 SMART WRKY_cls 196 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops9g01373 361 MobiDBLite consensus disorder prediction 332 361 - -
Rops9g01373 361 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 267 IPR044810 GO:0003700
Rops9g01373 361 MobiDBLite consensus disorder prediction 141 157 - -
Rops9g01373 361 MobiDBLite consensus disorder prediction 332 348 - -
Rops9g01373 361 Pfam WRKY DNA -binding domain 197 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01373 Rops-Chr9 22471609 22474817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01373 14 351 WRKY Transcription Factor Family AT2G40740 36.364 6.40e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops9g01373 WRKY 7.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01373 - - mtr:11424132 402.519