Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01370 ATGGAAGCACATCCAAACGCGACCTCCATGCTAAGAAGCAGGAGCATACCTTGTCTTCCACCTCCACCATTGCTGGCTCTGAGTACGAGGATGCCGTCGCCGTCGCCGTCACCGTCTTCTTCTGCCACCACCTCCTCCGAAACCAAACTATCCTTCTCTTCTCGAAACCCCAAATCCTCATTCCATCACCACTTTCCTCTCTTCTCTAACAATCCTCACACTCTTCAAAGCATGAAGTGCTTCTCTCACTCTGGACCCACCAACCCTATCCCCATATCGGGCATGCCCGAACCCGAACCCGAATCCGACACCCTTGTCGTGGTTTCATTCTACAAGTTCGCGGATTTCCCTGACCATTCCCTTATGAGAGACCCCTTGAAGCAACTCTGTCAACAACTGCGTGTTTCAGGTGGTATTATTCTTGCACCTGAAGGAATCAATGGCAGCATATGTGGCACACGGGAGTCAGTGGAGAAAGTTCTTGCATTTGTGCAAAGTGACGATCGTCTGAAGGGGCTAAGACATGTGGAATCGCCTGTGAGTCCTGAGGAGGAAGCCATCCATCGTGGTCATCACGGACATAGTGCCAGTTCTCCTCTTGCTGCAGGGGAAGATGTACCCTTCCGATGGGATCACGTGAGGGTCAAGTTGAAGAAAGAGATTGTCACTCTTGGGATGCCTACCGTATCGCCTACTGAAAGGGTGGGAAAGTATGTTAGCCCAAAAGATTGGAATGCTTTGATTAGTGATCCGGATATAGTGGTAATTGATGTGCGGAACAACTATGAAACCAGAATAGGAAAGTTTAAAGGAGCAGCTGATCCTTGTACTATGTCATTTCGTGAATTCCCATCTTGGGTGGAGGAGCGTTTCCAGCTTACCAAAACAGATGCTGAGCATCCAAAAGTTGATGTAAACAATTCAGTCAAAAGTGCCAAAAAAGAAATGGAGAATAAAAAACAACATTTGCCACGTGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAAAAAGCTTCAAGTTTACTTCTCAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATCCTGAAATATCTTGAGGAGGTTCCAGAGACACAGAGCCTCTGGGAGGGAGAGTGCTTTGTTTTTGACAAGCGAGTCTCTGTGGAGCATGGCTTGGTTCAAGGAAATTTCAAGCTCTGCTATGGTTGTAAGCAGCCTGTGAGTGATGCTGACATGGAAGCCCCAGAATATGAATATGGAGTCTCTTGTCCTCACTGTTTTGCACTGAAATCAGAAGAAGAAAAGGAAAGGGCTAGAGCTCGACAAAGACAATTTGAGAGATGGGGAATCATAGGTGGTCCTGATAAGGGTCGCAGGCCAACAACTCAACCGGATAGTGCTAGCAGAAAACCAAACCAGCTTTCACATTCTGTGTAA 1428 0.4706 MEAHPNATSMLRSRSIPCLPPPPLLALSTRMPSPSPSPSSSATTSSETKLSFSSRNPKSSFHHHFPLFSNNPHTLQSMKCFSHSGPTNPIPISGMPEPEPESDTLVVVSFYKFADFPDHSLMRDPLKQLCQQLRVSGGIILAPEGINGSICGTRESVEKVLAFVQSDDRLKGLRHVESPVSPEEEAIHRGHHGHSASSPLAAGEDVPFRWDHVRVKLKKEIVTLGMPTVSPTERVGKYVSPKDWNALISDPDIVVIDVRNNYETRIGKFKGAADPCTMSFREFPSWVEERFQLTKTDAEHPKVDVNNSVKSAKKEMENKKQHLPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPETQSLWEGECFVFDKRVSVEHGLVQGNFKLCYGCKQPVSDADMEAPEYEYGVSCPHCFALKSEEEKERARARQRQFERWGIIGGPDKGRRPTTQPDSASRKPNQLSHSV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01370 475 Coils Coil 302 322 - -
Rops9g01370 475 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 99 439 IPR020936 -
Rops9g01370 475 MobiDBLite consensus disorder prediction 30 57 - -
Rops9g01370 475 Pfam UPF0176 acylphosphatase like domain 106 221 IPR040503 -
Rops9g01370 475 CDD RHOD_YceA 236 363 - -
Rops9g01370 475 MobiDBLite consensus disorder prediction 435 475 - -
Rops9g01370 475 MobiDBLite consensus disorder prediction 181 200 - -
Rops9g01370 475 Pfam Rhodanese-like domain 240 363 IPR001763 -
Rops9g01370 475 ProSiteProfiles Rhodanese domain profile. 249 370 IPR001763 -
Rops9g01370 475 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 218 396 IPR036873 -
Rops9g01370 475 Hamap tRNA uridine(34) hydroxylase [trhO]. 103 407 IPR020936 -
Rops9g01370 475 MobiDBLite consensus disorder prediction 461 475 - -
Rops9g01370 475 SMART rhod_4 239 367 IPR001763 -
Rops9g01370 475 Gene3D - 223 405 IPR036873 -
Rops9g01370 475 MobiDBLite consensus disorder prediction 1 57 - -
Rops9g01370 475 Gene3D - 95 222 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01370 104 469 Sulfurtransferasese or Rhodanese AT2G40760 75.815 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01370 - - gmx:100784854 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01370 9 22434036 22437700 Rops9g01370 9 22434036 22437700 ECH