Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01364 ATGGTTTCCTCTCAGTTCTCTACCTTAAATGGAAATAGTTCACAGAAGCCTTTCTTGAACCAGTTGCTTCTTCCAAGTGGGTCTCCTGATTTTGTGGATTTTGAATTTTCTGATGTGTTTGGTCCATCTCCTGTTGAAGCCTCAATAGCAGTGAGTTCTGGGAAACCTGGAAATTTGATAGTTACACCAGGTTCAAGTGAAAATATTTACAATGATCCTGCTATCATTCACATCCGCTCTCAATCTTTACTGGCCCCCACAACCTATTTTAGTCAGTCCTTGGACCTTAGCAAGCTCACCTTACATGAAACAGGTGATACACTGGATCTTGTGGAGGAGGTCCTTACAGAAACACAGAAAGAACTTAAGGAACATTCTGTTAATAATGTTGACGTTGAGAAAAATAAATCAATTTTCAATAATTATTGTCTGAATCATCAGACTATTGGAGTTGAGGATTTTGAAGTTTTGAAGGTTGTTGGGCAAGGTGCTTTTGGTAAGGTGTACCAAGTGAGGAGGGCAGGTACTTCAGAAATATATGCTATGAAGGTCATGCGCAAGGATAAGATTTTGCAGAGAAATCAAGCTGAATATGTAAAATCTGAAAAGGATATATTGACAAAAGTGGACCATCCATTTATCGTACTGCTCAGATACTCATTCCAAACCAAGTATAGGTTGTACCTTGTGCTTGATTTTGTTAATGGTGGCCACTTGTTCTTTCAGCTTTATCACCAAGGCCTATTCAGGGAAGATTTGGCTCGCTTCTATGCTGCAGAGATTATTTGCGCTGTTTCTCATCTTCATGCAAATAATATAATGCACAGGGATCTTAAGCCTGAAAATATTCTTCTAGACGCAGATGGTCATGTAGTGTTAGCAGATTTTGGACTCGCTAAGCAAGTCAATGAGACTGCTAGGTCAAATTCTATGTGTGGAACTTTAGAGTACATGGCCCCTGAAATTGTTATGGGGAAAGGTCATGATAAGACAGCCGATTGGTGGAGTGTTGGAATTTTACTGTATGAAATGCTTACAGGGAAGCCTCCTTTTGTTGGTGGAAATAGACAAAAGATCCAGCAGAAGATAATTAAAGACAAAATCAAGCTCCCAGCTTTTTTATCAAGTGAGGCACATTCACTATTGAAAGGGCTGTTGCAGAAAGATGCAAGCAAACGCCTTGGCAATGGACCAAGTGGCAGTGAGGAGATTAAAAGGCACAAGTGGTTTAAGTCAGTCAACTGGAAGAAACTAGAAGCTCGTGAAATCAGGCCAAGCTTTGTCCCAGAAGTTGCTGGGAAGCACTGTGTTGCTAACTTTGAGGAGAGGTGGACAACCATGCCCTTGCTGGATTCTCCAGCTGCTAGTCCCAAGAATGGTGACAATACCTTCAAGAAGTTCTCCTATACTGGTACTCTCACTGTGTCATGA 1431 0.4095 MVSSQFSTLNGNSSQKPFLNQLLLPSGSPDFVDFEFSDVFGPSPVEASIAVSSGKPGNLIVTPGSSENIYNDPAIIHIRSQSLLAPTTYFSQSLDLSKLTLHETGDTLDLVEEVLTETQKELKEHSVNNVDVEKNKSIFNNYCLNHQTIGVEDFEVLKVVGQGAFGKVYQVRRAGTSEIYAMKVMRKDKILQRNQAEYVKSEKDILTKVDHPFIVLLRYSFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARFYAAEIICAVSHLHANNIMHRDLKPENILLDADGHVVLADFGLAKQVNETARSNSMCGTLEYMAPEIVMGKGHDKTADWWSVGILLYEMLTGKPPFVGGNRQKIQQKIIKDKIKLPAFLSSEAHSLLKGLLQKDASKRLGNGPSGSEEIKRHKWFKSVNWKKLEAREIRPSFVPEVAGKHCVANFEERWTTMPLLDSPAASPKNGDNTFKKFSYTGTLTVS* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01364 476 Gene3D Transferase(Phosphotransferase) domain 1 234 429 - -
Rops9g01364 476 SMART serkin_6 154 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01364 476 SUPERFAMILY Protein kinase-like (PK-like) 138 456 IPR011009 -
Rops9g01364 476 ProSiteProfiles Protein kinase domain profile. 154 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01364 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Rops9g01364 476 Gene3D Phosphorylase Kinase; domain 1 152 451 - -
Rops9g01364 476 CDD STKc_AGC 160 410 IPR045270 GO:0004674|GO:0005524
Rops9g01364 476 SMART pkinase_C_6 411 471 IPR000961 GO:0004674|GO:0005524|GO:0006468
Rops9g01364 476 Coils Coil 108 135 - -
Rops9g01364 476 FunFam Non-specific serine/threonine protein kinase 151 255 - -
Rops9g01364 476 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Rops9g01364 476 Pfam Protein kinase domain 154 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01364 476 FunFam Non-specific serine/threonine protein kinase 234 429 - -
Rops9g01364 476 PANTHER RIBOSOMAL PROTEIN S6 KINASE 119 470 - -
Rops9g01364 476 ProSiteProfiles AGC-kinase C-terminal domain profile. 411 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01364 Rops-Chr9 22332824 22336537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01364 1 470 AGC Kinase Gene Family AT3G08720 63.466 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Rops9g01364 Pkinase 2.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01364 K04688 - gmx:100803509 757.288