Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01362 ATGGCATCCAACCAAGGTGTCCTCTTAGCTCTTGACAAGGCCAAGACACAAAGCTATCATTACATGGCAATTGTGATAGCTGGGATGGGATTCTTCACTGATGCATATGATCTCTTTTGCATCACTGCAGTTATCAAACTTATTGGTCGCTTGTACTACTTTGACCCCACTAGTAGTAATCCAGGAAAGCTTCCAACCAATGTAAACAATGCAATAACTGGGGTTGCCTTATGTGGCACCCTGGCAGGGCAACTCTTCTTTGGCTGGCTTGGTGACAAGCTTGGTAGAAAAAAGGTTTATGGCATAACTCTTGCCACCATGGTGTTTTGTGCCTTGGCATCAGGGCTTTCTTTTGGCTCCACATCCAAAAGTGTGATAGCTAGTCTTTGCTTCTTCAGGTTCTGGCTAGGATTTGGCATTGGGGGAGACTACCCTCTCTCAGCTGTTATAATGTCAGAATATGCCAATCAAAAAACAAGAGGAGGTTTTATTGCCGCTGTCTTTGCAATGCAAGGAGTAGGAATATTGGTTGCTGGAGGTGTTGCCATGTTGGTCTCCAAACTATTCTTAGCAGCTTATCCAGCTGCTGATTTTGCAACTGATCCTGTGCTATCTACTCAGCCAGAAGGAGATTTTGTTTGGAGAATTGTTCTCATGTTTGGTGCATTTCCTGCAGCCTTCACTTATTATTGGAGAATGAAAATGCCTGAAACTGCAAGGTACACTGCCTTGGTGGAAGGAGATCACAAGAAGGCTGTTGAAGATATGGCCAAAGTTCTTGATAAGGACTTACCTTTGGAAGAATCAAATACCAGGACTTCTGCCAATGCCATGCCAAGACCCTCTTATGGATTATTCTCTAAAGAATTTCTTGATAGGCATGGGCTTCACCTTCTAGGAACAACTAGCACCTGGTTCTTGTTGGATATTGCCTTCTATAGTCTTCAACTCACACAAAAAGATATTTACCCTGCCAGTGGACTTGTACCCAAGGCTTCCAAAATGAATGCCATAGAGGAGGTGTATCAACTCTCTAGAGCAATGTTTGTGGTAGCCCTGTTTTCCACAGTTCCTGGGTACTGGTGCACAGTTTTCCTCATTGACAAGATTGGAAGGTACACAATCCAGCTTGTTGGATTCCTTATAATGTCTGCTTGTATGTGGGTTCTGGGACATAATTATAAAGAATATAGGGGATATTCTGAATGCGGCTCGGAATCAAGACATGATGTTTGTCGTGGAAACCAAATCATGTTTGTCATACTTTTTGGACTCACCCTATTCTTTGCCAATTTTGGACCCAATAGCACCACATTTATAGTGCCAGCAGAGCTGTTTCCAGCTAGGTTCCGTTCAACATGCCATGGAATATCAGCAGCAGCCGGTAAAGCAGGAGCTATCATTGGTGCTTTTGTGGTGCAAAGCTATGCAAATAGAAATGGAATCGGGAAGGCAATTATGACACTTTCATATGTCAACTTGGTTGGATTCTTTTGCACTTTCTTGGTGTCAGAAACACAAGGCCGATCACTGGAAGAAATCTCAGGAGAGGAGAAAGAACTCCAAGGCAATATTACTGAAGAGAAAGCAAATGAGACAACAAATGATGCAAAAGAGGGAACAAGAAACTCTAGTGTTGATAAATCTCCAGGAACTTCAATGGTTTAG 1668 0.4287 MASNQGVLLALDKAKTQSYHYMAIVIAGMGFFTDAYDLFCITAVIKLIGRLYYFDPTSSNPGKLPTNVNNAITGVALCGTLAGQLFFGWLGDKLGRKKVYGITLATMVFCALASGLSFGSTSKSVIASLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGGFIAAVFAMQGVGILVAGGVAMLVSKLFLAAYPAADFATDPVLSTQPEGDFVWRIVLMFGAFPAAFTYYWRMKMPETARYTALVEGDHKKAVEDMAKVLDKDLPLEESNTRTSANAMPRPSYGLFSKEFLDRHGLHLLGTTSTWFLLDIAFYSLQLTQKDIYPASGLVPKASKMNAIEEVYQLSRAMFVVALFSTVPGYWCTVFLIDKIGRYTIQLVGFLIMSACMWVLGHNYKEYRGYSECGSESRHDVCRGNQIMFVILFGLTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYANRNGIGKAIMTLSYVNLVGFFCTFLVSETQGRSLEEISGEEKELQGNITEEKANETTNDAKEGTRNSSVDKSPGTSMV* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01362 555 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 512 - -
Rops9g01362 555 FunFam Inorganic phosphate transporter 1-6 19 530 - -
Rops9g01362 555 Coils Coil 511 531 - -
Rops9g01362 555 CDD MFS_PhT 24 506 - -
Rops9g01362 555 MobiDBLite consensus disorder prediction 515 555 - -
Rops9g01362 555 MobiDBLite consensus disorder prediction 537 555 - -
Rops9g01362 555 Pfam Sugar (and other) transporter 24 515 IPR005828 GO:0016020|GO:0022857|GO:0055085
Rops9g01362 555 SUPERFAMILY MFS general substrate transporter 12 516 IPR036259 -
Rops9g01362 555 Gene3D MFS general substrate transporter like domains 269 532 IPR036259 -
Rops9g01362 555 Gene3D MFS general substrate transporter like domains 20 262 IPR036259 -
Rops9g01362 555 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Rops9g01362 555 MobiDBLite consensus disorder prediction 515 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01362 Rops-Chr9 22330388 22332055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01362 1 519 Inorganic Solute Cotransporters AT5G43360 61.726 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01362 K08176 - gmx:100820250 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01362 9 22330388 22332055 Rops9g01362 9 22330388 22332055 ECH