Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01360 ATGAAGTTCCAATTCTTTGTTGTTCCATTTGTTCTGCTAAGCTTCATACTATCTCTCTTTGGCTTGATTGTAGCTGACTTGAACTCTGACAGAAAAACTCTCCTTGAGTTTTTTTCTAGTGTCCCACATGCCCCAAGATTAAACTGGAATGACTCCACTCCAATTTGCACTTCATGGGTTGGTGTGACTTGCAACCCAAATCAAAGTCATGTCATTGGCATCCATCTTCCAGGGGTTGCATTCAAAGGCTCCATTCCAGAGAAAAGCCTAGGAAAACTAGTTTCTCTTAGAATTTTAAGCCTTCATTCAAATGGCCTCAGTGGAAATCTTCCTTCTGATATCCTCTCCATTCCTTCACTCCAATATGTAAACCTGCAGCACAATAACTTCTCAGGCCTAATCCCTTCTTCTGTCTCCCCTAAACTCATTGCATTGGATATTTCCTTTAACTCTTTCTCTGGCAGCATCCCACCTACATTTCAGAATCTCAGAAGACTAACCTCTTTGTATCTCCAAAACAATTCCATCTCTGGAGCTATTCCTGACTTCAACCTTCCAAGTATCAAATATTTGAATTTGAGCTATAATAACTTGAATGGCTCAATTCCAAATTCCATCAATCAATTCCCTTATACTTCTTTTGTTGGTAACTCTCTCTTATGTGGGCCACCTCTCAAAAATTGTTCTACAATCTCTCCTTCTCCATCTCCTTCTCCTGTTTACCAACCACTCTCTCCACCAACTACCCAAAATCAAAAAGCTCCCACTTCAAAGAATTACTTTGGTCTAGCTACTATACTAGCTCTAGTAGTTGGGGGCTGTGCTTTCCTCACTCTACTGGTCTTGGCGATCTTTGTGTTCTGTTTGAAGAAGAAAAAGAGTAAAAGCAGTGGTATACTTAAAGGAAAGGCACCTTGTGCTGGAAAGACTGAGGTTTCAAAGAGTTTTGGGAGTGGGGTGCAAGAGGCTGAAAAGAACAAATTGTTCTTCTTTGAAGGTTGCTCTTATAGCTTTGACCTTGAAGATTTATTGAAGGCTTCAGCTGAAGTTCTGGGAAAGGGTAGCTATGGAACAACATACAAGGCTGCATTGGAGGAGGGAACAACAGCGGTGGTTAAAAGGTTGAGGGAAGTTATGGCTGGAAAGAAGGAGTTTGAGCAACAGATGGAGGTTGTGGGAAGAATTGGAAGACACCCCAATGTCATACCCCTTACAGCTTATTATTATTCCAAAGATGAGAAACTTCTAGTTTATAACTACATGCCAGGAGGCAGCTTGTTTTCCTTGTTGCATGGAAACAGGGGTGAAGGAAGAACTCCATTAGATTGGGATTCACGAATAAAGATTGCACTTGGAGCTGCAAAGGGAATTGCTTCCATTCACACTGAGGGGGGTTCAAAGTTTGTTCATGGCAACATCAAGTCATCAAATGTGCTCATAACCCAAGAACTTGATGGTTGCATCACTGATGTTGGACTAACTCCTTTGATGAACACCACAGCAACCATGTCAAGAGTCAATGGCTACCGTGCTCCAGAAGTAGCTGAGTCAAGGAAGATCACACAAAAGTCTGATGTATACAGCTTTGGGGTGCTCCTTCTTGAAATGCTTACAGGTAAGACCCCATTGGGGTATCCTGGTCGTGATGACATGGTTGATCTTCCAAGATGGGTGAGGTCTGTGGTTCGTGAGGAATGGACAGCTGAAGTTTTTGATGAGGAATTGCTAAGAGGGCAATATGTTGAAGATGAGATGGTGCAGATGCTTCAGATTGCACTTGCATGTGTTGCAAAGATGGCAGATAATAGACCAACAATGGATGAAGCTGTTAGGAACATAGAGGAAATTAGGCACCCTGAGTTGAAGAACCTTACACCCTCTGAGTCTGATTCTAATGTACAAACACCATGA 1911 0.4212 MKFQFFVVPFVLLSFILSLFGLIVADLNSDRKTLLEFFSSVPHAPRLNWNDSTPICTSWVGVTCNPNQSHVIGIHLPGVAFKGSIPEKSLGKLVSLRILSLHSNGLSGNLPSDILSIPSLQYVNLQHNNFSGLIPSSVSPKLIALDISFNSFSGSIPPTFQNLRRLTSLYLQNNSISGAIPDFNLPSIKYLNLSYNNLNGSIPNSINQFPYTSFVGNSLLCGPPLKNCSTISPSPSPSPVYQPLSPPTTQNQKAPTSKNYFGLATILALVVGGCAFLTLLVLAIFVFCLKKKKSKSSGILKGKAPCAGKTEVSKSFGSGVQEAEKNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYKAALEEGTTAVVKRLREVMAGKKEFEQQMEVVGRIGRHPNVIPLTAYYYSKDEKLLVYNYMPGGSLFSLLHGNRGEGRTPLDWDSRIKIALGAAKGIASIHTEGGSKFVHGNIKSSNVLITQELDGCITDVGLTPLMNTTATMSRVNGYRAPEVAESRKITQKSDVYSFGVLLLEMLTGKTPLGYPGRDDMVDLPRWVRSVVREEWTAEVFDEELLRGQYVEDEMVQMLQIALACVAKMADNRPTMDEAVRNIEEIRHPELKNLTPSESDSNVQTP* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01360 636 Gene3D Transferase(Phosphotransferase) domain 1 421 634 - -
Rops9g01360 636 ProSitePatterns Protein kinases ATP-binding region signature. 351 382 IPR017441 GO:0005524
Rops9g01360 636 PANTHER OS05G0588300 PROTEIN 11 623 - -
Rops9g01360 636 SUPERFAMILY Protein kinase-like (PK-like) 349 613 IPR011009 -
Rops9g01360 636 SUPERFAMILY L domain-like 40 226 - -
Rops9g01360 636 Gene3D Ribonuclease Inhibitor 29 140 IPR032675 -
Rops9g01360 636 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 421 626 - -
Rops9g01360 636 ProSiteProfiles Protein kinase domain profile. 345 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01360 636 Pfam Protein kinase domain 349 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01360 636 CDD STKc_IRAK 351 616 - -
Rops9g01360 636 Gene3D Ribonuclease Inhibitor 141 230 IPR032675 -
Rops9g01360 636 FunFam Probable inactive receptor kinase RLK902 27 171 - -
Rops9g01360 636 Pfam Leucine Rich Repeat 188 206 IPR001611 GO:0005515
Rops9g01360 636 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Rops9g01360 636 Gene3D Phosphorylase Kinase; domain 1 310 420 - -
Rops9g01360 636 MobiDBLite consensus disorder prediction 233 253 - -
Rops9g01360 636 FunFam pollen receptor-like kinase 1 313 420 - -
Rops9g01360 636 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01360 Rops-Chr9 22310366 22314080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01360 3 634 Receptor kinase-like Gene Family AT5G58300 59.237 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops9g01360 Pkinase 2.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01360 - - gmx:100786974 988.793