Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01341 ATGATTGAATTTTCCTTTATCTTTTCACATGCAATGGCTTCCTTATGCAATATCTTCCTCATATTTTGCTTGTTCAATCTTTTGCTTGTTCATTCAGCTAGTGATGTTCCAATTAATGTGACAAAGCACTTCTCCTTTCCTGATTTCAGCTTCAACAATAACCCCAGACTAGTCCATGATGTGAAGCTTCTAGGCAGTGCCAAGTTCTCAAATGAAAAGGGTGCTCTTCAAATCCCAAATGAATCACAAGACACAGGCATAAGACACCAAGCAGGTAGAGGAATCTATTCCTTCCCAATTCGCCTTCTTGATCCAAGTACCAAGACCCCAGCTTCCTTTCAAACCACCTTTTCTTTTCAGCTGACCAATTCAACTACCTCTGAGCAAACTGATTATGGTGGTGGTAGTGGCCTAACCTTCATCATTGTCCCTGATGAGTTCACTGTGGGAAGGCCAGGACCTTGGCTTGCCATGCTCAATGATGCATGTGAGAATGATTACAAGGCAGTGGCAGTAGAGTTTGACACAAGAAAGAACCCAGAATTTGGAGATCCAAATGACAACCATGTTGGTATCAATTTAGGTACCATAGTATCTACCAAAATTGTCAATGTTTCTGATGTTGGAGTGTCCCTTAAGGATGGTTTTGTTCACCATGCTTGGATCACCTATGATGGTCCTCAAAGGAGAATGGATATTCGTCTTGGATCGGCCAACCAAGAAGTTTACCCCACCATACCTATCTTCTCAGAATCTTTGGATCTCTCTCCTTATCTAAATGAATACATGTTTGTGGGGTTCTCAGCTTCCACAGGTAACCACACCCAAATCCATAACATTCTCTCTTGGAACTTCACTTCCACTAGCCAAGCTTTTCTTCGTTTTCCTTCATCTGAAACCTGCCAGGGTAAGATCTTACTTGAGAATAATACAGAAACAACAGAAGATACCAAGAAGTCTACTAAGAATGAAACTCCACATAGCTTTTTGATTTTTGTGGCTGCAGTTGCATTGGCTTTGGCTGTTCTTATTGCTTTTTACTTCATTAGTAAGCATAGAAGAAATGCTTCCAAATCAAACACTTCATTGGATGCAGAGATTCACAGGCCAAGGCCTCCAAACAAACCAAGAAGGTTCACTTTTTCTGAACTTTCCTCTTCTACTAGATCATTCAGTGATATAGAATTGCTTGGTAGTGATTCTAGAGGAGTATACTATAGAGGAAAGCTTCCTAATGGAAGCCAAGTAGCTGTGAAAAGGTTCTCAGCTCAATTTCTCCACACACATGGATCAGATAGGAAACGTTTGTTGAAGGAAATCAAAGTCATAAGCCAAGTTCGCCACCCAAATTTGCTTCCTGTTAGAGGTTGGTGTCAAGACAACAATGAAATCATGGTGATCTATGACTTTGTCCATAATGGTAGCTTAGATAAATGGCTATTTGGAGCTGGTGTTCTTCCATGGACTAGAAGGTTCAAGGTTGTAAAAGATGTAGCTGATGGTTTGAGCTTCCTCCACTCTAAGCAACTAGCCCACAAGAACTTGAAATGTAGCAGTGTGTTTCTAGATGTCAGTTTCAGATCTGTTTTGGGAGATTTTGGGTTTGTGCTATTAGGGGCAGAATCAAAACAGTTTGAGTCAGCAGTGTGTCAAGGTGCTGATGTGTTTGGGTTTGGTGTGCTTGTGTTGGAAGTGATAGCTGGAAGGCCAAGGGTGGAGATAGATGATGGAAAACCAGAAGAGAGGAACTTGTTGGATTTTGCTTGGAACTTACATGAGACTAATGAGAAAGTGAAGCTTGTAGATAGAAGAATGGGATCATTGATCAACATGGAGCAAGCAATTCGTGTTCTTGAAATTGGGTTGCTTTGCACTCTCAATGAGAACAAAGGGAGACCCTCTATGGAGCAAGTGGTGGAGTTTCTTCTTAACATGGAGAAGCCTATTCCTGAGTTACCAAGAACTCGCCCTGTTGCATTGTTCCCTTATAATAGTGCAAACACTGGGCTCTGCAACAATTACTCTTGCACTTTTAAGTGA 2040 0.4127 MIEFSFIFSHAMASLCNIFLIFCLFNLLLVHSASDVPINVTKHFSFPDFSFNNNPRLVHDVKLLGSAKFSNEKGALQIPNESQDTGIRHQAGRGIYSFPIRLLDPSTKTPASFQTTFSFQLTNSTTSEQTDYGGGSGLTFIIVPDEFTVGRPGPWLAMLNDACENDYKAVAVEFDTRKNPEFGDPNDNHVGINLGTIVSTKIVNVSDVGVSLKDGFVHHAWITYDGPQRRMDIRLGSANQEVYPTIPIFSESLDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRFPSSETCQGKILLENNTETTEDTKKSTKNETPHSFLIFVAAVALALAVLIAFYFISKHRRNASKSNTSLDAEIHRPRPPNKPRRFTFSELSSSTRSFSDIELLGSDSRGVYYRGKLPNGSQVAVKRFSAQFLHTHGSDRKRLLKEIKVISQVRHPNLLPVRGWCQDNNEIMVIYDFVHNGSLDKWLFGAGVLPWTRRFKVVKDVADGLSFLHSKQLAHKNLKCSSVFLDVSFRSVLGDFGFVLLGAESKQFESAVCQGADVFGFGVLVLEVIAGRPRVEIDDGKPEERNLLDFAWNLHETNEKVKLVDRRMGSLINMEQAIRVLEIGLLCTLNENKGRPSMEQVVEFLLNMEKPIPELPRTRPVALFPYNSANTGLCNNYSCTFK* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01341 679 Gene3D Transferase(Phosphotransferase) domain 1 471 650 - -
Rops9g01341 679 PANTHER - 69 644 - -
Rops9g01341 679 SUPERFAMILY Protein kinase-like (PK-like) 370 642 IPR011009 -
Rops9g01341 679 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 41 295 - -
Rops9g01341 679 ProSiteProfiles Protein kinase domain profile. 391 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops9g01341 679 FunFam Lectin-domain containing receptor kinase A4.2 471 650 - -
Rops9g01341 679 Gene3D - 40 295 - -
Rops9g01341 679 Gene3D Phosphorylase Kinase; domain 1 362 470 - -
Rops9g01341 679 ProSitePatterns Legume lectins beta-chain signature. 170 176 IPR019825 -
Rops9g01341 679 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 353 470 - -
Rops9g01341 679 CDD lectin_legume_LecRK_Arcelin_ConA 43 288 IPR001220 GO:0030246
Rops9g01341 679 Pfam Legume lectin domain 43 290 IPR001220 GO:0030246
Rops9g01341 679 MobiDBLite consensus disorder prediction 359 379 - -
Rops9g01341 679 Pfam Protein tyrosine and serine/threonine kinase 396 640 IPR001245 GO:0004672|GO:0006468
Rops9g01341 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 43 289 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01341 Rops-Chr9 22118726 22120932 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01341 65 657 Receptor kinase-like Gene Family AT5G03140 32.283 2.62e-91 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Rops9g01341 Lectin_legB 2.4e-56 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01341 - - gmx:100781464 1110.52