Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01338 ATGAGTGACACAGTGAGAGGAAAGGAGGCAAAGAAGATGAAAAGTTTCAAGGAATGGTTCACATCATCTCAGGCTTTGCTAGCAATGTTACTAGTGCAAGTTTTTGCAACTGGGATGCAGATTTTATCAAGGGTCATTTTGGTTCAGGGTACTTTTGTTTTTTCACTCCTTGCATATCGTCATATTGTTGCTGCTATTTGTGTTGCCCCCTTTGCACTCTACTTTGAAAGAAACCGCCCAAAGAACTTCACTTGGAGAGTTTGGTTTTGGGCCTTTGTTAACGCATTAGTGGGGATGACCATGGCTCTAGGATTCTTCTATTATGGTCTGAGAGACACTTCAGCTACTTACTCTGTCAACTTTCTCAACTTGGTTCCTATATGCACCTTCATTTTATCTATCATATGCAGAATGGAGAGTGTGAAACTGCAAACTTTGTCAGGTAAAGCTAAGTCTATAGGGGCAATTTTATGTGTTGGGGGAGCTTTAGTTACCAGTCTTTACAATGGGAAGGAGTTTTATCTTGTTCATCATAATCACCACTCTCAACATGCTGGTGTGGCACACAAAACCAACATGCTTCGTGGCACTATCTTTTTGATTTGCAGTTGCTTCTCATACACAGCTTGGTTTATTTTGCAAGTCAAATTGCTTCATGTATTACCATTGAGGTATTTGGGAACATTGTTACAATGCATTATGGCAGCAATTCAAGCAGCAATAATAGGTGTAATCATTGATCCCAGTCATGCTTCTTGGAGATTACAATGGAATCTCCAACTAATCACAATATTGTACTCGGGAGCACTGGCCACGGCTGCAACGTTTTGCTTATTATCTTGGGCAATTACTGTCAAAGGACCTACTTATCCCCCAATGTTCAATCCACTGGCTCTTATTTTTGTGGCCATATCAGAAGCTATCATACTTGGGGAACCAATAAAAGTTGGAACGGTGCTGGGCATGGTTTTGATCATAATTGGATTGTACTCCTTTTTGTGGGGGAAAAAGAATGAGACACCGCGCTTGCCTCAAACAAATGTAGCAGCTGCAGAAGTATCAACAACCTTGAATGATGATCCTGCTTTGATGCGCTCATCAGCTGCAGTAGTACCAAGTTCTTCACCTAATGATAGTGTAGCTCTTGAAGTTGAAAAGACTGACAAAAAGTGA 1173 0.4092 MSDTVRGKEAKKMKSFKEWFTSSQALLAMLLVQVFATGMQILSRVILVQGTFVFSLLAYRHIVAAICVAPFALYFERNRPKNFTWRVWFWAFVNALVGMTMALGFFYYGLRDTSATYSVNFLNLVPICTFILSIICRMESVKLQTLSGKAKSIGAILCVGGALVTSLYNGKEFYLVHHNHHSQHAGVAHKTNMLRGTIFLICSCFSYTAWFILQVKLLHVLPLRYLGTLLQCIMAAIQAAIIGVIIDPSHASWRLQWNLQLITILYSGALATAATFCLLSWAITVKGPTYPPMFNPLALIFVAISEAIILGEPIKVGTVLGMVLIIIGLYSFLWGKKNETPRLPQTNVAAAEVSTTLNDDPALMRSSAAVVPSSSPNDSVALEVEKTDKK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01338 390 PANTHER WAT1-RELATED PROTEIN 25 345 IPR030184 GO:0016020|GO:0022857
Rops9g01338 390 MobiDBLite consensus disorder prediction 367 381 - -
Rops9g01338 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 337 - -
Rops9g01338 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 168 - -
Rops9g01338 390 Pfam EamA-like transporter family 195 332 IPR000620 GO:0016020
Rops9g01338 390 Pfam EamA-like transporter family 26 158 IPR000620 GO:0016020
Rops9g01338 390 MobiDBLite consensus disorder prediction 367 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01338 Rops-Chr9 22086406 22102849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01338 26 337 Nodulin-like Gene Family AT1G09380 36.677 1.23e-65 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01338 - - gmx:100782551 533.872