Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01337 ATGGAAGCAAGAGAGGAACATAGAGAGACACAAAATGAGAAAAGTGCACAGAGGCGAAAGAACAGAATAAGCTTTTCTGCTAGTCTGCCCAGTGATGTGCATGGTGCTTTTGCAAATAGTTTGTGTGCGGTAAGGTACTCAACCAACCCTTTTGTTGACATAAGATTGTCAATTCTTGAGATGATTTATAATGTGGGAGTTCATGACTGGGAAGAAATGGAAGAGTTAGTTTACTGTTATATTGCTCTCAACTCCCCAGAGCTTCATGATATTATATGTCAAGCATTTGTTAGTCTATGTTGTCCACTTTGTAATGAAGGGAAAAGCTAA 330 0.3879 MEAREEHRETQNEKSAQRRKNRISFSASLPSDVHGAFANSLCAVRYSTNPFVDIRLSILEMIYNVGVHDWEEMEELVYCYIALNSPELHDIICQAFVSLCCPLCNEGKS* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01337 109 ProSiteProfiles OVATE domain profile. 43 102 IPR006458 -
Rops9g01337 109 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 104 IPR038933 GO:0045892
Rops9g01337 109 MobiDBLite consensus disorder prediction 1 23 - -
Rops9g01337 109 MobiDBLite consensus disorder prediction 1 20 - -
Rops9g01337 109 NCBIfam uncharacterized plant-specific domain TIGR01568 44 103 IPR006458 -
Rops9g01337 109 Pfam Transcriptional repressor, ovate 47 102 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01337 Rops-Chr9 22085978 22086307 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops9g01337 Ovate 1.2e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01337 - - pper:18784630 125.176