Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops9g01321 | ATGAAGAAAACATCAGCCCCCAGTTTGCATCAGTCTAGCCAAAGAAAAAAGAATTCTAATCTCCAAGATAGTGGTACAGGAAATGACACAAAGAGACACAATTCTCAGACAAATCCTGCACAGAAATCATTCAAATCTGTTCTCAAGAAATTTGCTGCTGTTTTTACATTGATTTTCACAGGCAAAAAAGAAACAGCCTCAAGAGTTGTTAGAAGTGATGATAGAAATAATACATCAAAAGTCAGAGGGGTGTTATCATCTTCAACTGATTTATCATCTGAAGGTAACAACAAGAATTCATCAAAATGGAAGTTTTCTTATTCCTATGCATCATCTAGCACTGCAAGTGGACAACTTGGAATTGGGAATTTCTCCTTTGAAGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGATAATCAGATTGGTGAAGGTGGATTTGGAACAGTCTATAAAGGAAAGCTTAATGATGGATCTCTTGTTGCCGTGAAGCGCGCCAAGAAGGAAGTATTACACAATCACCTATTTGAGTTCAAGAATGAGATAAACACCTTGTCAAAAATTGAGCATCGGAATCTTGTGAAGTTATATGGATATGTGGAGCATGGAGATGAGAAGATTATTGTTGTTGAATACGTTGGTAATGGAACACTTAGAGAACATTTAAATGGCACGCGGGGAGATGGGCTAGAAATTGGTGAGCGACTAGACATAGCAATTGATGTAGCCCATGCAATAACTTACCTTCATATGTACACAGATAATCCAATTATCCATAGAGATATCAAAGCATCAAACATCCTAATTACTGAGAACCTAGGAGCCAAAGTGGCAGACTTCGGTTTTGCAAGGTTGTCTGATGACCCTGGTGCTACCCATATTTCAACTCAAGTTAAAGGAACAGCTGGATACATGGATCCTGAGTACCTGAGAACATATCAACTCACTGAAAAGAGTGATGTTTATTCCTTTGGCGTATTGCTAGTTGAAATGATGACAGGACGACATCCAATAGAACAAAAGAGACCCCCCAATGAGAGAGTGACAATCAGATGGGCAATGCAGATGCTGAAAAAAGGTGATGTTGTGTTTGTCATGGACCCAAGACTAAGAAGATGTCCAGCCTCCATCAAGGCAATGAAGAAGGTTATCAAGCTAGCTTCCCAATGCCTTTCACCTTCAAGACAATCAAGGCCACCTATGAAGACTTGTGCAGAGGTTCTTTGGGGAATCCGTAAAAGTTTCAAAGATGAAACCATTCCTACTCCTCCCCTTCCTTCTCACCATTCTGAAATTTTTCCTCAAAGAGAAAAGAATAAGCATATGTTATTTGGTATTGAAGATGATGACGACTATAAATTTAGCTCTGCACCTAATCATATTCATTCATAA | 1392 | 0.3872 | MKKTSAPSLHQSSQRKKNSNLQDSGTGNDTKRHNSQTNPAQKSFKSVLKKFAAVFTLIFTGKKETASRVVRSDDRNNTSKVRGVLSSSTDLSSEGNNKNSSKWKFSYSYASSSTASGQLGIGNFSFEEIYKSTAKFSPDNQIGEGGFGTVYKGKLNDGSLVAVKRAKKEVLHNHLFEFKNEINTLSKIEHRNLVKLYGYVEHGDEKIIVVEYVGNGTLREHLNGTRGDGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLGAKVADFGFARLSDDPGATHISTQVKGTAGYMDPEYLRTYQLTEKSDVYSFGVLLVEMMTGRHPIEQKRPPNERVTIRWAMQMLKKGDVVFVMDPRLRRCPASIKAMKKVIKLASQCLSPSRQSRPPMKTCAEVLWGIRKSFKDETIPTPPLPSHHSEIFPQREKNKHMLFGIEDDDDYKFSSAPNHIHS* | 464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops9g01321 | 463 | Gene3D | Transferase(Phosphotransferase) domain 1 | 213 | 421 | - | - | |
Rops9g01321 | 463 | Gene3D | Phosphorylase Kinase; domain 1 | 96 | 212 | - | - | |
Rops9g01321 | 463 | CDD | STKc_IRAK | 142 | 408 | - | - | |
Rops9g01321 | 463 | SMART | serkin_6 | 136 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g01321 | 463 | FunFam | Calmodulin-binding receptor-like cytoplasmic kinase 3 | 213 | 421 | - | - | |
Rops9g01321 | 463 | ProSitePatterns | Protein kinases ATP-binding region signature. | 142 | 168 | IPR017441 | GO:0005524 | |
Rops9g01321 | 463 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 257 | 269 | IPR008271 | GO:0004672|GO:0006468 | |
Rops9g01321 | 463 | FunFam | Calmodulin-binding receptor-like cytoplasmic kinase 1 | 100 | 212 | - | - | |
Rops9g01321 | 463 | Pfam | Protein tyrosine and serine/threonine kinase | 139 | 408 | IPR001245 | GO:0004672|GO:0006468 | |
Rops9g01321 | 463 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Rops9g01321 | 463 | SUPERFAMILY | Protein kinase-like (PK-like) | 117 | 411 | IPR011009 | - | |
Rops9g01321 | 463 | MobiDBLite | consensus disorder prediction | 79 | 99 | - | - | |
Rops9g01321 | 463 | ProSiteProfiles | Protein kinase domain profile. | 136 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops9g01321 | 463 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 22 | 430 | - | - | |
Rops9g01321 | 463 | MobiDBLite | consensus disorder prediction | 66 | 99 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops9g01321 | Rops-Chr9 | 21810561 | 21814410 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops9g01321 | 108 | 401 | Receptor kinase-like Gene Family | AT1G79620 | 44.554 | 2.95e-71 | 241 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IV | Rops9g01321 | PK_Tyr_Ser-Thr | 2.8e-53 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops9g01321 | - | - | lja:Lj2g3v2222900.1 | 746.888 |