Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01305 ATGAATGTGCTCCTTTTAAAGTTCAAATTTGGAAGTGTCATTAACGTGGCCTATCACACCACAATACAAATGGAAACCCTCCCTCTTTTGCTTACCCTTGCAGCTGTTCTATCCACCTATTTCCTTTGGTTCCATCTCCTTGCTCGAAACCTAACCGGTCCAAAAGCATGGCCCTTCGTGGGAAGCCTCCCAGGCCTGTTCAAGAACCGGAACCGGGTTCACGATTGGATAGCCGGAAACCTCCGTTCAACCGGCGGTTCAGCCACCTACCAAACCTGCATCATCCCTTTCCCTTTCTTGGCTCGCAAGCAAGGGTTCTACACTGTCACGTGCCACCCCAAGAACCTCGAACATATCCTCCGAACCCGGTTCGATAACTACCCTAAAGGACCGAAATGGCAAACCTCATTTCACGACTTATTAGGCCAAGGAATCTTCAACAGTGACGGAGAAACATGGCTCATGCAACGTAAAACCGCAGCACTAGAATTCACAACACGAACCCTTAAACAAGCCATGGCTCGTTGGGTGAACCGTGCCATAAAGAACCGTCTTTGGTGCATTCTAGATAAAGCAACAAAAGATAACATCTCAGTTGATTTGCAAGACCTTCTTCTACGCTTAACCTTTGATAACATTTGTGGACTCACATTCGGTAAAGACCCGGAAACCCTTTCCCCGGATCTACCCGAAAACCCGTTTTCCATAGCTTTTGACACTGCAACTGAAGCTACTATGCATAGGTTCCTCTACCCGGGTCTCGTTTGGAGGTTCCAGAAGCTTCTGAACATTGGACCAGAGAAGAGATTGAAACAAAGCCTTAAAATCGTCGAAACTTACATGAACGACGCCGTTAAGGATCGAAAGGAATCCCCTTCAGACGACTTGCTTTCACGTTTCATGAAGAAACGTGACGTTGAAGGGAAACCCTTATCAACCTCCGTGTTGCAACGCATCGTTTTGAACTTCGTCCTCGCCGGAAGGGACACGTCATCGGTGGCACTAAGCTGGTTCTTCTGGCTCGTAATGAACCACCCTAGAGTGGAGAAAAAGATAGTTAGCGAGATAACGGCGGTTCTGGAGGAAACTCGCGGCGGAGAACGGCGAAGGTGGACGGAGGAGCCACTGGATTTCGAGGAAGTTGATAGGTTGGTCTATCTTAAGGCTGCGTTGGCTGAAACGCTGCGTTTGTACCCTTCGGTGCCGCAGGATTTTAAACAGGCCGTCGCCGATGATGTTTTGCCGGACGGAACGGTGGTTCCGGGGGGATCGACGGTGACGTATTCGATATATTCGGTGGGGAGGATGGAAACTATATGGGGTGAGGATTGCATGGAGTTTAAACCGGAGAGGTGGCTTTCGGTTCGAGGTGACCGGTTCGAACCGCCAAAGGATGGGTTCAAGTTTGTGGCTTTTAATGCTGGACCGAGAACTTGTTTGGGGAAGGACTTGGCTTACCTGCAGATGAAGTCTGTGGCTGTGGCTGTGCTGTTGCGCTACCGGCTGTCGCCGGTTCCCGGTCACCGGGTAGAGCAAAAAATGTCTCTCACTTTGTTCATGAAGAATGGGCTTAGGGTGTTCTTGCATCCACGTCAGCTTCATGAGGTTGCCACCTCACCATAG 1623 0.4978 MNVLLLKFKFGSVINVAYHTTIQMETLPLLLTLAAVLSTYFLWFHLLARNLTGPKAWPFVGSLPGLFKNRNRVHDWIAGNLRSTGGSATYQTCIIPFPFLARKQGFYTVTCHPKNLEHILRTRFDNYPKGPKWQTSFHDLLGQGIFNSDGETWLMQRKTAALEFTTRTLKQAMARWVNRAIKNRLWCILDKATKDNISVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPENPFSIAFDTATEATMHRFLYPGLVWRFQKLLNIGPEKRLKQSLKIVETYMNDAVKDRKESPSDDLLSRFMKKRDVEGKPLSTSVLQRIVLNFVLAGRDTSSVALSWFFWLVMNHPRVEKKIVSEITAVLEETRGGERRRWTEEPLDFEEVDRLVYLKAALAETLRLYPSVPQDFKQAVADDVLPDGTVVPGGSTVTYSIYSVGRMETIWGEDCMEFKPERWLSVRGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAVAVLLRYRLSPVPGHRVEQKMSLTLFMKNGLRVFLHPRQLHEVATSP* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01305 540 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 CDD CYP86A 91 524 - -
Rops9g01305 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Rops9g01305 540 Pfam Cytochrome P450 108 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 SUPERFAMILY Cytochrome P450 51 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 FunFam Cytochrome P450 45 534 - -
Rops9g01305 540 Gene3D Cytochrome P450 47 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops9g01305 540 PANTHER CYTOCHROME P450 42 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01305 Rops-Chr9 21630631 21632253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01305 24 531 Cytochrome P450 AT5G58860 76.863 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01305 K15401 - gmx:100788343 938.717