Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01271 ATGACGGTTGTTGATGATAAGAGTAATGGGAACAAGAAGCGAAAGAGAATGAAAAGAAAGCTTCCTGTCAATGAGAGAGTCGAGGTGAGGAGTTTTGAAGATGGTTTTCTGGGCTCATGGCATCCGGGGACAGTTATCCGTTGCCGGAGGCTGAAGCGTCATGTCAGATATGACAATATTCTAGATGATGAAGGAGTGAATTATCTTGTGGATGTGGTGGATGTTTCATCTGTCTTGGATGGTGTCAGTTCTTGTTCTTCATCCTCTTCCTCAGATTGTTGCAATGAACGTGGTCTCATTAGACCAGTGCCTCCAGTGATTGAGATTGGGGAAAAGGACCTTCAATTTGCTGTGTGTGTTGATGTGAGTTATCAAGAAGCTTGGTGGGAAGGTGTTATATTTGATCACAGTGATGGAATGAAGGAGAGGAGCATATTCTTCCCAGATTTGGGTGATGAAATGAAGGTTGGAATTCATCAATTGCGGATCACTCAAGACTGGGATGAAGCAACTGAGAATTGGAAGCCAAGAGGGAATTGGGTGTTTCTTGAATTTGTTGAGGAGCGTCATAGGGTATCCTATCTCCCAGTTTCAATAAAGCAAATTTGGTATGATGTAAGGGAAAGAAAGGATTTTGACAAAATAAGAGACTGGACTTGTAATGTGAGGGACTTGTGGAGAGACCCTGTGATGGAGATAATTGGTGACTACTATGCTCTCACACTACAAGAAGTTCTTCCAGCCTTAAAACTGGAGTCATTTGAACCTACTGGTAATGTTCCATGTGATGCTGATCATGGTAAAAAACGCAGATGCTCAGCATCCATAGTTTGGCGACCTTTGATACTGTCTGAAGTTGAATTCTGTTCTGATGTTATTGATCAATATGTCCTTGGATGTAAGAGCAAGACAATTAGGGAACTGTTGAAGACAAAAGTGAGAAAACATCTTGCATATCTTGGATGGACAATTGAGTGGACTCAAAGTAAGTATTTTCCTGAACAAAGGAGATACAGGTACAAGTCACCTGATCCAAATGACCAGAAAGTTTACACTTCAATTCTTCAAGTTTCTAAATATATGCAAAAGGAGTCCAACATAAACTCTGCACTGCCCCAAATTGATTACAATAGGAGGATGCAATCTACAATTGACAGCAATCTTTCACATCTGCTTTCCGATCAACCCCGAGGGAACCAGGACTTAGATGTTTATCCTCCAATTGAGGCATCTTCTCCTGTTAAAGTTGAAATTGAACCTGAATTTTGTCCTCAAGCTGTTGTGAAATATTACTTGCATTCATTAGAGAACCATAGGGCTGATAAAAGAAAATGGAAACTGAAAGCAAAGAAGCATCTCTTATCAGAAGGATGGATCTTTGACTACCCGACTGAAAAAAGGAGGACAACTTTGTACAAGTCTCCACAAAATCAATGTTTGGGATCACTTCGAGGTGCATGCAGACTATACATTAAGGAGAAGATTCCTGAATGGACTATTTCTGGCAGAAGATCATTGAATGTCTCATCCATTATGGAGTTAAGTGTTGATCGTGTTGATATTGATGATCTATTGCAGTGTGTGTCCCAATTGCTTCAAAAAGTGCCTGAGTTGCATAGTATAGATGGTATACCACCAACTAGATCAACTGGGAACAGAAACCATAAACCCACCAGGAATTCAAAGGCCAGCCTACCAGAATGTCAGGGGAATGAGTTACCCACACGGGTGCTCAGATCAAGCAAAAGGGTGCAGGAGGTGCATGCCCCTTGTCCATCACACCAAAAACCTCAAAATGTTCTGTCTTGGTTAATAGATAACAACATAGTGTTGCCAAGATATAAGGTCTATTGCCGGGCAAATGGAGACAGGAACCCTCCTGTGACTGAGGGGAGGATAACTCATGATGGAATCAAGTGTAGCTGTTGTCAGAAGGTGTATGGTCTTGCTGGCTTTGTAAATCATGCTGGGGGCAATAGTAATTTCAGGCCTTCTGCTAGTGTCTTTTTGAAGGATGGCAGGACATTCCTGATGGTGATTGGTTTTGTCCATCATGCCGATGCGGGATTTGCGGCCAAAACAAATTCAAAGGGACTGAGGATGGACATTTTCTTACTTGTATTCAATGTGAACATAAATATATATGCAGGCCTCCAAAATCTATTAGGAAAACCAATTTTAGTGGGTGTGAACAATCTAACTTGGACATTGCTGAAGTGTGTCAACTCTGAGAATTATGATGCAGAGAGTTATAGTAAACTCAGTGTTGCACTTTCAGTGATGCATGAGTGTTTTGAGACCCTGAAGAACCCTTTCTCTGGCAGAGATCTTGTGGAAGATGTTTTATTCAACAGAAGGTCGGAGCTTAATCGATTAAATTTCCAGGGCTTCTATACTGTACTTCTGGAGAGAAATGAAGAATTGGTTAGTGTGGCGACTATCAGGATATTTGGAGGGAAGGTAGCAGAAGTACCTCTTGTAGGCACAAGATTTCAGTATCGTCGACTAGGAATGTGTCGCGTTTTAATGGATGAGCTTGAAAAGAAGCTCATGCAACTTGGGGTGGAGAGGCTAGTCTTGCCTGCTGTTCCTAGCGTGCTAGAAACATGGACCAATTCTTTTGGTTTTGAGAAAATGACGAATTTTGAGAGATCACAGTTTTTGGACTATACTTTCCTAGATTTTCAGGGAACCTTCATGTGCCAGAAACTGGTGACAAGGAGTCCATCCCCAGAATCGGTTTTAACAAGAGAGACACATCCAAAACCACATGAAGTTTACTCTCTTAAGTGTAGAATTGACTTTAACAAGTCCAGTCCAGCATCTGAAGTGGACCAAGAAGAAGAGATTGACAAAAGTAGAATGATGGATCTACAAGTGGTGGAGTGTGTCTCAACTCTTCCTACTTCCTAA 2913 0.4147 MTVVDDKSNGNKKRKRMKRKLPVNERVEVRSFEDGFLGSWHPGTVIRCRRLKRHVRYDNILDDEGVNYLVDVVDVSSVLDGVSSCSSSSSSDCCNERGLIRPVPPVIEIGEKDLQFAVCVDVSYQEAWWEGVIFDHSDGMKERSIFFPDLGDEMKVGIHQLRITQDWDEATENWKPRGNWVFLEFVEERHRVSYLPVSIKQIWYDVRERKDFDKIRDWTCNVRDLWRDPVMEIIGDYYALTLQEVLPALKLESFEPTGNVPCDADHGKKRRCSASIVWRPLILSEVEFCSDVIDQYVLGCKSKTIRELLKTKVRKHLAYLGWTIEWTQSKYFPEQRRYRYKSPDPNDQKVYTSILQVSKYMQKESNINSALPQIDYNRRMQSTIDSNLSHLLSDQPRGNQDLDVYPPIEASSPVKVEIEPEFCPQAVVKYYLHSLENHRADKRKWKLKAKKHLLSEGWIFDYPTEKRRTTLYKSPQNQCLGSLRGACRLYIKEKIPEWTISGRRSLNVSSIMELSVDRVDIDDLLQCVSQLLQKVPELHSIDGIPPTRSTGNRNHKPTRNSKASLPECQGNELPTRVLRSSKRVQEVHAPCPSHQKPQNVLSWLIDNNIVLPRYKVYCRANGDRNPPVTEGRITHDGIKCSCCQKVYGLAGFVNHAGGNSNFRPSASVFLKDGRTFLMVIGFVHHADAGFAAKTNSKGLRMDIFLLVFNVNINIYAGLQNLLGKPILVGVNNLTWTLLKCVNSENYDAESYSKLSVALSVMHECFETLKNPFSGRDLVEDVLFNRRSELNRLNFQGFYTVLLERNEELVSVATIRIFGGKVAEVPLVGTRFQYRRLGMCRVLMDELEKKLMQLGVERLVLPAVPSVLETWTNSFGFEKMTNFERSQFLDYTFLDFQGTFMCQKLVTRSPSPESVLTRETHPKPHEVYSLKCRIDFNKSSPASEVDQEEEIDKSRMMDLQVVECVSTLPTS* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01271 970 MobiDBLite consensus disorder prediction 542 567 - -
Rops9g01271 970 MobiDBLite consensus disorder prediction 545 567 - -
Rops9g01271 970 CDD NAT_SF 800 860 - -
Rops9g01271 970 Gene3D - 733 908 - -
Rops9g01271 970 PANTHER PHD FINGER PROTEIN 12 713 944 IPR042163 GO:0003714|GO:0045892
Rops9g01271 970 SMART agenet_At_2 19 83 IPR014002 -
Rops9g01271 970 SMART agenet_At_2 112 169 IPR014002 -
Rops9g01271 970 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 789 886 IPR016181 -
Rops9g01271 970 Pfam Tify domain binding domain 631 677 IPR032308 -
Rops9g01271 970 Pfam Agenet domain 25 105 IPR008395 -
Rops9g01271 970 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 744 905 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01271 Rops-Chr9 21123438 21128790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01271 714 848 PHD Transcription Factor Family AT5G58610 57.639 7.57e-41 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01271 - - gmx:102661511 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01271 9 21123438 21128790 Rops9g01271 9 21123438 21128790 ECH
Rops11g02402 11 40832330 40843132 Rops9g01271 9 21123438 21128790 PCT