Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01268 ATGTCTTGCTCCGTCGCAGTTTCAAATTCTCCGGTGTTCTCTCCTTCTTCTTCCCTCTTTTGTTCCAAGCCTTCTATTATTTCTTCTTCCCCGGAAGCCCTTTCCCTTTCTCTCTCTCATCTTAAACCAAGTTCTTCTACGACGTCGTCTTGTGCTTCCCCTTCTTCTTGCTCCTCCCCTTCTTCTCCCTTTCGTCTTCGCCTTCCCAAACCCCATAACGCTTCTTCTTCTTCCACTACCTCACCAAACGGTACCGTTTTGAAGAGGAAGAGACCCGCGAGGCTGGATATACCCGTTAGTTCTCTCACCTTTGGGGTTCCGGCGACGCCGTCCACAGCGGCGCGTGATGTAGTGGAGAATGAGGGAGATGGGTTTTCTGTGTATTGCAAGAGAGGAAGGAGGGAGTACATGGAAGATCGTTACACCGCTGGAGATAATTTACGCGGAGAACACAAACTGGCTTTTTTTGGCATATTTGATGGGCATGGAGGTGCTAAAGCTGCAGAATTTGCTGCAAATAACTTGGAAAAGAATGTCTTAGATGAGGTGATCATGAGAGATGATGATGATGTTGAGGAGGCAGTGAAGCGTGGTTACCTCAACACTGATTCTGATTTCTTAAAAGAGGATCTTCATGGTGGCTCTTGCTGTGTAACAGCATTGATTAGGAATGGCAACCTTGTTGTGTCCAATGCTGGTGATTGCCGCGCTGTCATTAGCAGACTAGGTGTTGCTGAGGCACTAACATCTGATCACAGACCTTCAAGGGAAGATGAAAGGGACAGAATTGAGACTCTGGGTGGCTATGTTGATTTATGCCGTGGTGTTTGGAGGATCCAGGGATCTCTGGCTGTATCTAGGGGAATTGGAGATAGGCACTTGAAACAATGGGTGACTGCAGAGCCTGAGACCAAAGTTATCAAAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAAGCAGTAGATATTGCTCGTCCTTTTTGCATTGGTAACAACAAACCACAACCAATGCTGGCTTGTAAAAAGCTCGTAGATTTGTCTGTTTCACGAGGCTCTATGGATGATACAAGTGTTATGCTAATCAAATTGAAGCACTATATTTGA 1140 0.4544 MSCSVAVSNSPVFSPSSSLFCSKPSIISSSPEALSLSLSHLKPSSSTTSSCASPSSCSSPSSPFRLRLPKPHNASSSSTTSPNGTVLKRKRPARLDIPVSSLTFGVPATPSTAARDVVENEGDGFSVYCKRGRREYMEDRYTAGDNLRGEHKLAFFGIFDGHGGAKAAEFAANNLEKNVLDEVIMRDDDDVEEAVKRGYLNTDSDFLKEDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRLGVAEALTSDHRPSREDERDRIETLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVIKIEPEHDLLILASDGLWDKVSNQEAVDIARPFCIGNNKPQPMLACKKLVDLSVSRGSMDDTSVMLIKLKHYI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01268 379 MobiDBLite consensus disorder prediction 45 92 - -
Rops9g01268 379 Pfam Protein phosphatase 2C 125 367 IPR001932 -
Rops9g01268 379 MobiDBLite consensus disorder prediction 71 86 - -
Rops9g01268 379 FunFam probable protein phosphatase 2C 25 117 378 - -
Rops9g01268 379 ProSitePatterns PPM-type phosphatase domain signature. 155 163 IPR000222 GO:0043169
Rops9g01268 379 ProSiteProfiles PPM-type phosphatase domain profile. 124 375 IPR001932 -
Rops9g01268 379 SMART PP2C_4 114 373 IPR001932 -
Rops9g01268 379 PANTHER PROTEIN PHOSPHATASE 2C 70 373 IPR015655 GO:0004722|GO:0006470
Rops9g01268 379 Gene3D - 124 378 IPR036457 -
Rops9g01268 379 MobiDBLite consensus disorder prediction 45 63 - -
Rops9g01268 379 CDD PP2Cc 124 375 IPR001932 -
Rops9g01268 379 SUPERFAMILY PP2C-like 125 376 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01268 Rops-Chr9 21049079 21051353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01268 1 379 PP2C-type Phosphatase Gene Family AT2G30020 64.322 2.06e-170 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01268 K17506 - gmx:100797934 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g01268 9 21049079 21051353 Rops9g01268 9 21049079 21051353 ECH
Rops11g02399 11 40718483 40720517 Rops9g01268 9 21049079 21051353 ECH
Rops11g02399 11 40718483 40720517 Rops9g01268 9 21049079 21051353 PCT