Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g01263 ATGACTGACACCATAACAGCCACAACCGAGAAGCTTTTTGAGATATATGAAGATAAGGACAATGCAAGGGAGGATGAGATTGCTGCACTGGGAGGTCAAACTGCTTCCGGAGTTAATGTTTTAGTTCCTTCTACAATAGACTCAAAGAGATACAAGAGTATCATAGGATGCATCCAATTGAAACCACCATCCAGTACCCATAGGTTGACAGGACTTATGATTGGAATCCTCGGAGAAAATATGGAGGTTGTTTTAGCAGAATGTTTGAAAGACTTTGGTCCTTGGATGGTTACACACGCCATAGAATTGTTGACGGCAGGGAGCGAGCAAGCAGAGATCCTTCTACATGATGAGCGTTATAACTTGGGTGGAATCAGTATAGTGGAACTGCATCGGCTTGTATATGCTCAAGTTCTATCATCGCATGCATTGACGTGGCAAATAGCTCCAATATATTTAACATCGTGCATGAAGCAACGCCAATGGGCTTATGTGGTTATATGCCCCGGGACTCCACGTTCATGTCGTTGCATGCATATGAGGTAA 546 0.4341 MTDTITATTEKLFEIYEDKDNAREDEIAALGGQTASGVNVLVPSTIDSKRYKSIIGCIQLKPPSSTHRLTGLMIGILGENMEVVLAECLKDFGPWMVTHAIELLTAGSEQAEILLHDERYNLGGISIVELHRLVYAQVLSSHALTWQIAPIYLTSCMKQRQWAYVVICPGTPRSCRCMHMR* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g01263 181 PANTHER FROUNT PROTEIN-RELATED 56 160 IPR011502 -
Rops9g01263 181 Pfam Nup85 Nucleoporin 57 160 IPR011502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g01263 Rops-Chr9 20971862 20972407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops9g01263 1 41 C2H2 Transcription Factor Family AT5G06160 68.293 8.41e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops9g01263 K14304 - gmx:100785741 186.808